New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2512516	15 (0.530)	4 (0.150)	4/196	2.1	21.7%	coding (171/1254 nt)	h16_B2212	conserved hypothetical protein
	?	AM260480	= 2512524	15 (0.570)					coding (163/1254 nt)	h16_B2212	conserved hypothetical protein

GCGCCGCGGGATGGGCCGGCACGCCGTAATAGACCCGCACGCCGCGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGCCCACAGCCGCCCCGCCTCGCTCGCGCGCAGCGCGAACACCAGCCCCGCCGCAATAAT  >  AM260480/2512401‑2512626                                                                                                                            |                                                                                                       gcgcCGCGGGATGGGCCGGCACGCCGTAATAGACCCGCACGCCGCGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATggccagcggc                                                                                              >  2:26407‑M2/1‑124 (MQ=255) gcgcCGCGGGATGGGCCGGCACGCCGTAATAGACCCGCACGCCGCGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAgcgc                                                                                               >  2:779885/1‑133 (MQ=255)                                     gCACGCCGCGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGc                                                                                   >  1:428287/1‑109 (MQ=255)                                     gCACGCCGCGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGc                                                                                   <  2:428287/109‑1 (MQ=255)                                     gCACGCCGCGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGcc                                                          >  1:687628/1‑134 (MQ=255)                                         gccgcGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCcgc                                                                                      >  1:721652/1‑102 (MQ=255)                                         gccgcGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCcgc                                                                                      <  2:721652/102‑1 (MQ=255)                                          ccgcGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCcgc                                                                                      >  1:740065/1‑101 (MQ=255)                                          ccgcGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCcgc                                                                                      <  2:740065/101‑1 (MQ=255)                                          ccgcGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGCCCACAg                                                     <  2:687628/134‑1 (MQ=255)                                                      aGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATggccagcggcaccggccagctgggcacgctgggagcgttggcgttcgtggctggctggttgc                                          >  2:70598‑M2/1‑71 (MQ=255)                                                              gccagccaCGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGCCCACAGCCGCCCCGCCTCGCTcgcgc                                 >  2:232445/1‑134 (MQ=255)                                                                             cAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATggccagcggcaccggccagctg                                                                                  >  1:152236‑M2/1‑48 (MQ=255)                                                                             cAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATggccagcggcaccggccagctg                                                                                  <  2:152236‑M2/70‑23 (MQ=255)                                                                                               cAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGCCCACAGCCGCCCCGCCTCGCTCGCGCGCAGCGCGAACACCAGCCCCGCCGCaataat  >  2:520476/1‑132 (MQ=255)                                                                                                         gTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGc                                                                                   >  1:355134/1‑41 (MQ=255)                                                                                                         gTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGc                                                                                   <  2:355134/41‑1 (MQ=255)                                                                                                           ggcGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGCCCACAGCCGCCCCGCCtcgctcgc                                   >  1:916274/3‑87 (MQ=255)                                                                                                           ggcGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGCCCACAGCCGCCCCGCCtcgctcgc                                   <  2:916274/85‑1 (MQ=255)                                                                                                                            |                                                                                                       GCGCCGCGGGATGGGCCGGCACGCCGTAATAGACCCGCACGCCGCGGTAGATCAGCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCGCGCTGATGGCCAGCGCCAGGCCCGCGGCCGACACCAGTACGTGCCCGAACGCCCACAGCCGCCCCGCCTCGCTCGCGCGCAGCGCGAACACCAGCCCCGCCGCAATAAT  >  AM260480/2512401‑2512626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.