New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM260479 = 181305825 (0.920)5 (0.260)
+GATTACTTCCTGCAGGCACGCCTGAATCTGCG
3/148 1.8 22.3% coding (333/453 nt) h16_A1665 predicted redox protein, regulator of disulfide‑bond formation
?AM260479 1813091 = 25 (0.920)coding (300/453 nt) h16_A1665 predicted redox protein, regulator of disulfide‑bond formation

GGTCAGGGAGTTACGACGTAAACACGTTCAGCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACCGC  >  AM260479/1812928‑1813180
                                                                                                                                  |                                                                                                                          
ggTCAGGGAGTTACGACGTAAACACGTTCAGCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGgcgcgcgc                                                                                                                         <  2:602625/134‑1 (MQ=255)
        aGTTACGACGTAAACACGTTCAGCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAg                                                                                                                 >  1:373910/1‑134 (MQ=255)
               acgTAAACACGTTCAGCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGcc                                                                                                          <  2:17503/134‑1 (MQ=255)
                cgTAAACACGTTCAGCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCt                                                                                                         >  1:556315/1‑134 (MQ=255)
                             aGCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATc                                                                                            <  2:593594/134‑1 (MQ=255)
                              gcgcCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATcc                                                                                           >  1:446521/1‑134 (MQ=255)
                                gcCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCcgc                                                                                         >  2:809981/1‑134 (MQ=255)
                                gcCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCcgc                                                                                         >  1:880619/1‑134 (MQ=255)
                                                 gcgGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGt                                                                        >  2:740724/1‑134 (MQ=255)
                                                  cgGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTc                                                                       >  1:309050/1‑134 (MQ=255)
                                                          cTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGgattacttcctgcaggcacgcctgaatctgcgcgcgccggtctggcccaggtcgacttcga                                                               <  2:307055‑M1/134‑62 (MQ=255)
                                                            tCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGAtt                                                                                                                    <  1:312913/79‑1 (MQ=255)
                                                            tCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGAtt                                                                                                                    >  2:312913/1‑79 (MQ=255)
                                                             cGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGAt                                                              <  2:373910/132‑1 (MQ=255)
                                                                       cAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAg                                                  >  1:748440/1‑134 (MQ=255)
                                                                              cATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAgg                                                 >  1:811370/1‑128 (MQ=255)
                                                                              cATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAgg                                                 <  2:811370/128‑1 (MQ=255)
                                                                                   gcggcgTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAg                                      >  1:967524/1‑134 (MQ=255)
                                                                                    cggcgTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTc                                                                       >  2:461579/1‑100 (MQ=255)
                                                                                    cggcgTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTc                                                                       <  1:461579/100‑1 (MQ=255)
                                                                                               aGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGgattacttcctgcaggcacgcctgaatctgcgcgcgccggtctggcccaggtcgacttcgatgtccacggccaggtcggacggcag                                      >  2:525587‑M1/1‑36 (MQ=255)
                                                                                               aGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGgattacttcctgcaggcacgcctgaatctgcgcgcgccggtctggcccaggtcgacttcgatgtccacggccaggtcggacggcag                                      <  1:525587‑M1/122‑87 (MQ=255)
                                                                                                                cTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGc         <  2:880619/134‑1 (MQ=255)
                                                                                                                cTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGc         <  1:740724/134‑1 (MQ=255)
                                                                                                                    ggCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGAc     <  2:967524/134‑1 (MQ=255)
                                                                                                                       aGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACcgc  <  2:995525/134‑1 (MQ=255)
                                                                                                                            cGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCt                              >  2:21997/1‑101 (MQ=255)
                                                                                                                            cGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCt                              <  1:21997/101‑1 (MQ=255)
                                                                                                                                  ggattacttcctgcaggcacgcctgaatctgcgcgcgcc                                                                                      >  2:294986‑M1/1‑1 (MQ=255)
                                                                                                                                  ggattacttcctgcaggcacgcctgaatctgcgcgcgcc                                                                                      <  1:294986‑M1/39‑39 (MQ=255)
                                                                                                                                  |                                                                                                                          
GGTCAGGGAGTTACGACGTAAACACGTTCAGCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACCGC  >  AM260479/1812928‑1813180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.