| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 1813058 | 25 (0.920) | 5 (0.260) +GATTACTTCCTGCAGGCACGCCTGAATCTGCG |
3/148 | 1.8 | 22.3% | coding (333/453 nt) | h16_A1665 | predicted redox protein, regulator of disulfide‑bond formation |
| ? | AM260479 | 1813091 = | 25 (0.920) | coding (300/453 nt) | h16_A1665 | predicted redox protein, regulator of disulfide‑bond formation | |||||
GCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACCGCGGCGATGTAGCACGCCGACCAGGCACCCGC > AM260479/1812958‑1813210 | gcgcCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATcc > 1:446521/1‑134 (MQ=255) gcCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCcgc > 1:880619/1‑134 (MQ=255) gcCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCcgc > 2:809981/1‑134 (MQ=255) gcgGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGt > 2:740724/1‑134 (MQ=255) cgGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTc > 1:309050/1‑134 (MQ=255) cttcgagtaggggcagatcgcatcggcggcgtgagcgagttgcgtagcgacatcctgcggcaggcccggcgcggattacttcctgcaggcacgcctgaatctgcgCGCGCCGGTCTGGCCCAGGTCGACTTCGa < 2:307055‑M2/29‑1 (MQ=255) cGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGAt < 2:373910/132‑1 (MQ=255) cAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAg > 1:748440/1‑134 (MQ=255) cATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAgg < 2:811370/128‑1 (MQ=255) cATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAgg > 1:811370/1‑128 (MQ=255) gcggcgTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAg > 1:967524/1‑134 (MQ=255) cggcgTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTc > 2:461579/1‑100 (MQ=255) cggcgTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTc < 1:461579/100‑1 (MQ=255) agttgcgtagcgacatcctgcggcaggcccggcgcggattacttcctgcaggcacgcctgaatctgcgCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAg < 1:525587‑M2/54‑1 (MQ=255) agttgcgtagcgacatcctgcggcaggcccggcgcggattacttcctgcaggcacgcctgaatctgcgCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAg > 2:525587‑M2/69‑122 (MQ=255) cTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGc < 1:740724/134‑1 (MQ=255) cTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGc < 2:880619/134‑1 (MQ=255) ggCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGAc < 2:967524/134‑1 (MQ=255) aGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACcgc < 2:995525/134‑1 (MQ=255) cGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCt > 2:21997/1‑101 (MQ=255) cGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCt < 1:21997/101‑1 (MQ=255) ggattacttcctgcaggcacgcctgaatctgcgCGCGcc > 2:294986‑M2/34‑39 (MQ=255) ggattacttcctgcaggcacgcctgaatctgcgCGCGcc < 1:294986‑M2/6‑1 (MQ=255) gATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACCGCGGCGATGTAGCACGcc > 1:583206/1‑134 (MQ=255) aTTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACCGCGGCGATGTAGCACGcc > 1:663081/1‑133 (MQ=255) gCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGc < 2:387353/65‑1 (MQ=255) gCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGc > 1:387353/1‑65 (MQ=255) gCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACCGCGGCGATGTAGCACGCCGACCAGGCACCcgc > 2:972591/1‑133 (MQ=255) cAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAg < 2:749230/66‑1 (MQ=255) cAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAg > 1:749230/1‑66 (MQ=255) | GCGCCACCTCGATATTGCCGCGGGTTGCCTTCGAGTAGGGGCAGATCGCATCGGCGGCGTGAGCGAGTTGCGTAGCGACATCCTGCGGCAGGCCCGGCGCGCGCAGATTCAGGCGTGCCTGCAGGAAGTAATCCGCGCCGGTCTGGCCCAGGTCGACTTCGATGTCCACGGCCAGGTCGGACGGCAGTTCCAGCTTCATCTCCTTGGCCACGAGGCCGACCGCGGCGATGTAGCACGCCGACCAGGCACCCGC > AM260479/1812958‑1813210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |