| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 588488 = | 17 (0.600) | 4 (0.150) | 4/198 | 2.1 | 25.9% | coding (238/741 nt) | h16_B0521 | conserved hypothetical protein |
| ? | AM260480 | 588510 = | 7 (0.260) | coding (216/741 nt) | h16_B0521 | conserved hypothetical protein | |||||
GGCGATAGACCGCGTAGTCGACCTGCGCGTCCACGGGGTCGGGCAGCGCGGACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAGTGCTGTCGGCAGCACGTGCGGCAGGCGGCGTTGCCGGCGCATTGGCCTTCAGCGCCGATGACAGCGCGATCGCGTCCGCCCAGCCAAG > AM260480/588365‑588602 | ggCGATAGACCGCGTAGTCGACCTGCGCGTCCACGGGGTCGGGCAGCGCGGACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCAcgcgcgcg > 1:421162/1‑134 (MQ=255) ccGCGTAGTCGACCTGCGCGTCCACGGGGTCGGGCAGCGCGGACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGt < 1:536404/134‑1 (MQ=255) aGTCGACCTGCGCGTCCACGGGGTCGGGCAGCGCGGACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCt > 1:1035624/1‑132 (MQ=255) tCGACCTGCGCGTCCACGGGGTCGGGCAGCGCGGACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAGt < 2:421162/134‑1 (MQ=255) cttggctgggcggacgcgatcgcgctgtcatcggcgctgaaggccaatgcgccggcaacgccgcctgccgcacgtgctgccgacagcactgagGCACGCGCGCGCATTCGCGTGCCTCAGTGCTGTCg > 1:1077898‑M1/94‑128 (MQ=255) cttggctgggcggacgcgatcgcgctgtcatcggcgctgaaggccaatgcgccggcaacgccgcctgccgcacgtgctgccgacagcactgagGCACGCGCGCGCATTCGCGTGCCTCAGTGCTGTCg < 2:1077898‑M1/35‑1 (MQ=255) gACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTTTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAg < 2:1068621/100‑1 (MQ=255) gACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCAcgcgcgc < 2:318992/83‑1 (MQ=255) gACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCAcgcgcgc > 1:318992/1‑83 (MQ=255) gACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAg > 1:1068621/1‑100 (MQ=255) tcatcggcgctgaaggccaatgcgccggcaacgccgcctgccgcacgtgctgccgacagcactgagGCACGCGCGCGCATTCGCGTGCCTc > 2:581648‑M1/67‑91 (MQ=255) tcatcggcgctgaaggccaatgcgccggcaacgccgcctgccgcacgtgctgccgacagcactgagGCACGCGCGCGCATTCGCGTGCCTc < 1:581648‑M1/25‑1 (MQ=255) ggcccgCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAGTGCTGTCGGCAGCACGTGCGGCAGGCGGCGTTGCCGGCGCATTGGc > 1:832358/1‑134 (MQ=255) cgcTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCAtt > 1:49472/1‑67 (MQ=255) cgcTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCAtt < 2:49472/67‑1 (MQ=255) tggtgTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCAtt > 2:1113961/1‑51 (MQ=255) tggtgTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCAtt < 1:1113961/51‑1 (MQ=255) aCGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGc < 2:151606/47‑1 (MQ=255) aCGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGc > 1:151606/1‑47 (MQ=255) tGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAGTGCTGTCGGCAGCACGTGCGGCAGGCGGCGTTGCCGGCGCATTGGCCTTCAGCGCCGATGACAGCGCGATCGCGTCCGCCCagcta < 2:36456/134‑3 (MQ=255) gCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAGTGCTGTCGGCAGCACGTGCGGCAGGCGGCGTTGCCGGCGCATTGGCCTTCAGCGCCGATGACAGCGCGATCGCGTCCGCCCagccaag > 1:149432/1‑134 (MQ=255) | GGCGATAGACCGCGTAGTCGACCTGCGCGTCCACGGGGTCGGGCAGCGCGGACGGCCGGCCCGGCCCGCGCCGCTTGCCGGCAAGCGTGGTGTCTTCCACGATGGCACCGGCCAGCGCGGCGCGCACGCGCGCGCATTCGCGTGCCTCAGTGCTGTCGGCAGCACGTGCGGCAGGCGGCGTTGCCGGCGCATTGGCCTTCAGCGCCGATGACAGCGCGATCGCGTCCGCCCAGCCAAG > AM260480/588365‑588602 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |