New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 3801778	17 (0.630)	6 (0.240)	6/192	1.5	21.7%	coding (163/699 nt)	h16_A3529	Acetyltransferase
	?	AM260479	= 3801935	28 (1.140)					coding (320/699 nt)	h16_A3529	Acetyltransferase

CGTGATCGAAGCCTATGTCGACAGCATCGACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAATGTGCGCACGCTGTACATGCA  >  AM260479/3801822‑3802067                                                                                                                  |                                                                                                                                     cGTGATCGAAGCCTATGTCGACAGCATCGACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAAcgcccagggc                                                                                                                            >  2:517357‑M2/1‑114 (MQ=255) cGTGATCGAAGCCTATGTCGACAGCATCGACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAAcgcccagggc                                                                                                                            <  1:517357‑M2/124‑11 (MQ=255) cGTGATCGAAGCCTATGTCGACAGCATCAACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCg                                                                                                                   >  1:1047998/1‑133 (MQ=255)         aaGCCTATGTCGACAGCATCGACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGc                                                                                                          <  2:221327/134‑1 (MQ=255)                tGTCGACAGCATCGACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCgtgtcgg                                                                                                   >  1:104286/1‑134 (MQ=255)                        gCATCGACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGc                                                                                           <  2:423/134‑1 (MQ=255)                                  cGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCcgc                                                                                  <  2:679115/133‑1 (MQ=255)                                            aGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCAt                                                                       >  2:559897/1‑134 (MQ=255)                                                  ttCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGc                                                                                                          <  2:956442/93‑1 (MQ=255)                                                  ttCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGc                                                                                                          >  1:956442/1‑93 (MQ=255)                                                  ttCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAg                                                                 >  2:1033360/1‑134 (MQ=255)                                                  ttCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAg                                                                 >  1:86031/1‑134 (MQ=255)                                                                             cTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCa                                      <  2:980553/134‑1 (MQ=255)                                                                                aTCGGCGTGGGCCACTTCGCCAACCTGCGCGACAAcgcccagggcgaggaaatgcttcagcaggcgcgagcggtggtgggccgccagctcgcgcaccagtacggtggcgcggtgggtggcctgtgcggcttcgg                                   <  1:405748‑M2/134‑100 (MQ=255)                                                                                    gCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCg                                >  2:552231/1‑133 (MQ=255)                                                                                     cGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGc                               >  1:678323/1‑133 (MQ=255)                                                                                     cGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGc                               >  2:377421/1‑133 (MQ=255)                                                                                      gTGGGCCACTTCGCCAACCTGCGCGACAAcgcccagggcgaggaaatgcttcagcaggcgcgagcggtggtgggccgccagctcgcgcaccagtacggtggcgcggtgggtggcctgtgcggcttcggctgcct                             >  2:405748‑M2/1‑29 (MQ=255)                                                                                              cTTCGCCAACCTGCGCGACAAcgcccagggcgaggaaatgcttcagcaggcgcgagcggtggtgggccgccagctc                                                                               >  1:6801‑M2/1‑21 (MQ=255)                                                                                              cTTCGCCAACCTGCGCGACAAcgcccagggcgaggaaatgcttcagcaggcgcgagcggtggtgggccgccagctc                                                                               <  2:6801‑M2/76‑56 (MQ=255)                                                                                              cTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAAtg                     <  2:1047998/134‑1 (MQ=255)                                                                                                  gCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAATGTgc                  <  1:1033360/133‑1 (MQ=255)                                                                                                   ccAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACg                                    >  1:969937/1‑114 (MQ=255)                                                                                                   ccAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACg                                    <  2:969937/114‑1 (MQ=255)                                                                                                   ccAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAATGTgcgc                <  2:738497/134‑1 (MQ=255)                                                                                                   ccAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAATGTgcgc                <  2:86031/134‑1 (MQ=255)                                                                                                   ccAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAATGTgcgc                <  1:377421/134‑1 (MQ=255)                                                                                                     aaCCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGc                                                                   <  2:347756/81‑1 (MQ=255)                                                                                                     aaCCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGc                                                                   >  1:347756/1‑81 (MQ=255)                                                                                                       ccTGCGCGACAAcgcccagggcgaggaaatgcttcagcaggcgcgagcggtggtgggccgccagctcgcgcacc                                                                        >  2:243404‑M2/1‑12 (MQ=255)                                                                                                       ccTGCGCGACAAcgcccagggcgaggaaatgcttcagcaggcgcgagcggtggtgggccgccagctcgcgcacc                                                                        <  1:243404‑M2/74‑63 (MQ=255)                                                                                                               aCAACGCCCATGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAAtgtg                   <  2:437766/119‑1 (MQ=255)                                                                                                               aCAACGCCCATGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAAtgtg                   >  1:437766/1‑119 (MQ=255)                                                                                                               aCAACGCCCAGGGCCGCGTGGCGGAGTTCGGCgtgtcggtgtcg                                                                                              <  2:52132/44‑1 (MQ=255)                                                                                                               aCAACGCCCAGGGCCGCGTGGCGGAGTTCGGCgtgtcggtgtcg                                                                                              >  1:52132/1‑44 (MQ=255)                                                                                                                 aaCGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAATGTGCGCACGCTGTACATGCa  <  1:559897/134‑1 (MQ=255)                                                                                                                  |                                                                                                                                     CGTGATCGAAGCCTATGTCGACAGCATCGACTTCGACCATGACAGCGTGTTCGGCGTCTACGACGACAAGCTCGAACTGATCGGCGTGGGCCACTTCGCCAACCTGCGCGACAACGCCCAGGGCCGCGTGGCGGAGTTCGGCGTGTCGGTGTCGGGCAGCGCCCGCGGGCGCGGCATCGGCAGCGCGCTGTTCGAGCGTGCCGCGATCCACGGCCGCAATACCAATGTGCGCACGCTGTACATGCA  >  AM260479/3801822‑3802067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.