Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1380848	1380906	59	3 [0]	[2] 4	h16_A1272	conserved hypothetical protein

CACCCGCGAGAAATTCTCGCGCGATGTGCCAGGCGGGGACCGGCGCAATGAGTTCCGCGGTCGCGAGGGCGGTGCCGGCGTGTCCGACCGCGCGGTGCGCGACCGGGCAGGCGGGCAGGAGCGGCCGGGTGCCG  >  AM260479/1380714‑1380847                                                                                                                                      | cACCCGCGAGAAATTCTCGCGCGATGTGCCAGGCGGGGACCGGCGCAATGAGTTCCGCGGTCGCGAGGGCGGTGCCGGCGTGTCCGACCGCGCGGTGCGCGACCGGGCAGGCGGGCAGGAGCGGCCGGGTGCCg  <  2:610656/134‑1 (MQ=255)                                       aCCGGCGCAATGAGTTCCGCGGTCGCGAGGGCGGTGCCGGCGTGTCCGACCGCGCGGTGCGCGACCGGGCAGGCGGGCAGGAGCGGCCGGGTGCCg  >  1:348927/1‑96 (MQ=255)                                       aCCGGCGCAATGAGTTCCGCGGTCGCGAGGGCGGTGCCGGCGTGTCCGACCGCGCGGTGCGCGACCGGGCAGGCGGGCAGGAGCGGCCGGGTGCCg  <  2:348927/96‑1 (MQ=255)                                                                                                                                      | CACCCGCGAGAAATTCTCGCGCGATGTGCCAGGCGGGGACCGGCGCAATGAGTTCCGCGGTCGCGAGGGCGGTGCCGGCGTGTCCGACCGCGCGGTGCGCGACCGGGCAGGCGGGCAGGAGCGGCCGGGTGCCG  >  AM260479/1380714‑1380847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑