Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1380848	1380906	59	3 [0]	[2] 4	h16_A1272	conserved hypothetical protein

CGGTGATCGCGCTGGCGAACGGGGTGGTGATCGGGCCGGGGTCTCTGACCGGGCCGGAGTTTCCGATCGAGGCGGCGTATCTGACCGGGCCGGTGCATCGGAC  >  AM260479/1380894‑1380996              |                                                                                          cGGTGATCGCGCTGGCGAACGGGGTGGTGATCGGGCCGGGGTCTCTGACCGGGCCGGAGTTTCCGATCGAGGCGGCGTATCTGACCGGGCCGGTGCATCGGAc  >  1:886125/1‑103 (MQ=255) cGGTGATCGCGCTGGCGAACGGGGTGGTGATCGGGCCGGGGTCTCTGACCGGGCCGGAGTTTCCGATCGAGGCGGCGTATCTGACCGGGCCGGTGCATCGGAc  <  2:886125/103‑1 (MQ=255)              ggCGAACGGGGTGGTGATCGGGCCGGGGTCTCTGACCGGGCCGGAGTTTCCGATCGa                                   >  1:514471/1‑57 (MQ=255)              ggCGAACGGGGGGGTGATCGGGCCGGGGTCTCTGACCGGGCCGGAGTTTCCGATCGa                                   <  2:514471/57‑1 (MQ=255)              |                                                                                          CGGTGATCGCGCTGGCGAACGGGGTGGTGATCGGGCCGGGGTCTCTGACCGGGCCGGAGTTTCCGATCGAGGCGGCGTATCTGACCGGGCCGGTGCATCGGAC  >  AM260479/1380894‑1380996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑