| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AM260479 | 1,464,441 | Δ37 bp | coding (125‑161/552 nt) | h16_A1354 → | conserved hypothetical protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AM260479 | 1464441 | 1464477 | 37 | 23 [1] | [0] 22 | h16_A1354 | conserved hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 1464440 | 1 (0.040) | 22 (0.810) | 18/212 | 0.4 | 97.8% | coding (124/552 nt) | h16_A1354 | conserved hypothetical protein |
| ? | AM260479 | 1464478 = | 0 (0.000) | coding (162/552 nt) | h16_A1354 | conserved hypothetical protein | |||||
GGGCGAACCGTCCAGCAGTGCCGCCACACGAGCACCTGGCTGCCTCTGGCATTGCGGCCATGAGCAACCGGTGCAAGGTCGACAACTGCTGGTGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGGCCGCGC > AM260479/1464349‑1464604 | gatgccatgcacgcctgtgacctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTg < 2:285393‑M2/5‑1 (MQ=255) ccatgcacgcctgtgacctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACg > 1:512028‑M2/126‑134 (MQ=255) ccatgcacgcctgtgacctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACg > 1:525485‑M2/126‑134 (MQ=255) tgacctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGcc < 1:256727‑M2/21‑1 (MQ=255) ctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGAt < 2:388757‑M2/26‑1 (MQ=255) ggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACgg > 1:506153‑M2/95‑134 (MQ=255) aaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGt < 1:477985‑M2/48‑1 (MQ=255) cgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAg < 1:357321‑M2/51‑1 (MQ=255) ccgccacacgagcaccgggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAata < 1:546828‑M2/61‑1 (MQ=255) ccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACgg > 1:130006‑M2/70‑79 (MQ=255) ccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACgg < 2:130006‑M2/10‑1 (MQ=255) gcctctggcattgcggccatgagcaaccggtgccaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAg > 2:97506‑M2/52‑102 (MQ=255) gcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAg < 1:97506‑M2/51‑1 (MQ=255) tggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGt < 2:512028‑M2/86‑1 (MQ=255) ggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGa > 2:59726‑M2/46‑134 (MQ=255) cattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTTAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACt < 2:1055177‑M2/91‑1 (MQ=255) gccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGa > 1:413323‑M2/37‑134 (MQ=255) tgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGAt < 2:1013410‑M2/26‑1 (MQ=255) accggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGc > 1:32572‑M2/27‑134 (MQ=255) aggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAgg > 2:676943‑M2/18‑133 (MQ=255) agccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGgccgc < 2:413323‑M2/125‑1 (MQ=255) ccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGgccgcgc > 2:1112376‑M2/8‑134 (MQ=255) | GGGCGAACCGTCCAGCAGTGCCGCCACACGAGCACCTGGCTGCCTCTGGCATTGCGGCCATGAGCAACCGGTGCAAGGTCGACAACTGCTGGTGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGGCCGCGC > AM260479/1464349‑1464604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |