New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM260480 1920889 =20 (0.610)5 (0.170) 5/192 2.1 20.0% coding (639/819 nt) h16_B1690 Thioesterase
?AM260480 1920962 = 22 (0.750)coding (712/819 nt) h16_B1690 Thioesterase

TCGTGGAACCGAGCACGGCATCCGTGATGGTGTCCAGCACGTCCTGCGCCGCCTCGTGCAGGAAGAAATGCCCGCCCGCGAACAGCCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGCGGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260480/1921031‑1920889
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcgggCATTTCTTCCTGCACGAGGCGGCGCAGGACGTGCTGGACACCATCACGGATGCCGTGCTCGGTTCCACGATGCGCGCCACCAGAGACCACGGCCATGCGCTCGCCTGACATGGCCGCGCCAGCGCA  >  AM260480/1920962‑1921087
                                                                                                                                                                                                                                                                             
TCGTGGAACCGAGCACGGCATCCGTGATGGTGTCCAGCACGTCCTGCGCCGCCTCGTGCAGGAAGAAATGCCCGCCCGCGAACAGCCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATC                                                                                                                                         >  1:539184/1‑134
  GTGGAACCGAGCACGGCATCCGTGATGGTGTCCAGCACGTCCTGCGCCGCCTCGTGCAGGAAGAAATGCCCGCCCGCGAACAGCCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGC                                                                                                                                       <  1:732574/134‑1
                                                                           CCGCGAACAGCCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGC                                                                                                                                       >  1:1092983/1‑61
                                                                           CCGCGAACAGCCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGC                                                                                                                                       <  2:1092983/61‑1
                                                                             GCGAACAACCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGCGGGCGGGCATTTCTTCCTGCACGAGGCGGCGCAGGACGTGCTGGACACCATCACGGATGCCGTGCTCGGTTCCAC                                                            >  1:877725/1‑134
                                                                              CGAACAGCCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGCGGGCGGGCATTTCTTCCTGCACGAGGCGGCGCAGGACGTGCTGGACACCATCACGGATGCCGTGCTCGGTTCCAC                                                            >  2:337490/1‑133
                                                                                                 GTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGCGGGCGGGCATTTCTTCCTGCACGAGGCGGCG                                                                                                        <  1:409044/70‑1
                                                                                                 GTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGCGGGCGGGCATTTCTTCCTGCACGAGGCGGCG                                                                                                        >  2:409044/1‑70
                                                                                                    GTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGCGGGCGGGCATTTCTTCCTGCACGAGGCGGCGCAGGACGTGCTGGACACCATCACGGATGCCGTGCTCGGTTCCACGATGCGCGCCACCAGAGACCAC                                      <  1:337490/133‑1
                                                                                                                                       CGGGCGGGCATTTCTTCCTGCACGAGGCGGCGCAGGACGTGCTGGACACCATCACGGATGCCGTGCTCGGTTCCACGATGCGCGCCACCAGAGACCACGGCCATGCGCTCGCCTGACATGGCCGCGCCAGCGCA  >  2:128170/1‑134
                                                                                                                                                                                                                                                                             
TCGTGGAACCGAGCACGGCATCCGTGATGGTGTCCAGCACGTCCTGCGCCGCCTCGTGCAGGAAGAAATGCCCGCCCGCGAACAGCCGGTGGCTGCAGTCGTGCAGGGTCTCGTCGCGCCACGCGGCCAGCATCGCGGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260480/1921031‑1920889
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcgggCATTTCTTCCTGCACGAGGCGGCGCAGGACGTGCTGGACACCATCACGGATGCCGTGCTCGGTTCCACGATGCGCGCCACCAGAGACCACGGCCATGCGCTCGCCTGACATGGCCGCGCCAGCGCA  >  AM260480/1920962‑1921087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.