Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	570441	570496	56	3 [1]	[2] 3	h16_A0542/h16_A0543	signal transduction histidine kinase/response regulator, OmpR‑family

AGAGCAGCAGCAGCGGCGCCAGCATCCAGTCGAGGATCTCACCGAACAATGAGCGCGGCGCGGAATTTGCCGCGCTTTCCTCCAGGTGCGGCAACGCGTCGGCCAGGTCCTGGTCGGTAGTGTCCGGGGCCGGG  >  AM260479/570310‑570443                                                                                                                                   |    agagCAGCAGCAGCGGCGCCAGCATCCAGTCGAGGATCTCACCGAACAATGAGCGCGGCGCGGAATTTGCCGCGCTTTCCTCCAGGTGCGGCAACGCGTCGGCCAGGTCCTGGTCGGTAGTGTccggggccggg  <  1:434886/134‑1 (MQ=255)                                                        cggcgcggAATTTGCCGCGCTTTCCTCCAGGTGCGGCAACGCGTCGGCCAGGTCCTGGTCGGTAGTGTccggggcc     <  1:187298/76‑1 (MQ=255)                                                        cggcgcggAATTTGCCGCGCTTTCCTCCAGGTGCGGCAACGCGTCGGCCAGGTCCTGGTCGGTAGTGTccggggcc     >  2:187298/1‑76 (MQ=255)                                                                                                                                   |    AGAGCAGCAGCAGCGGCGCCAGCATCCAGTCGAGGATCTCACCGAACAATGAGCGCGGCGCGGAATTTGCCGCGCTTTCCTCCAGGTGCGGCAACGCGTCGGCCAGGTCCTGGTCGGTAGTGTCCGGGGCCGGG  >  AM260479/570310‑570443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑