Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	570441	570496	56	3 [1]	[2] 3	h16_A0542/h16_A0543	signal transduction histidine kinase/response regulator, OmpR‑family

ACGCGCCGCCAGGGCAGTCGCAGCAGGCTCATCTCGGCGAGGTTGCGCTCAGGTCAGTCGCGTGGCCTGCGGTGGGGTCGGATCAGTGATGCGTGGCCACCGCCGGCTGGAATTTCTCCAGGCAGTAGCCAAGCCCGCGCACGGTGGCGATGCG  >  AM260479/570477‑570630                     |                                                                                                                                      aCGCGCCGCCAGGGCAGTCGCAGCAGGCTCATCTCGGCGAGGTTGCGCTc                                                                                                          >  1:1031042/1‑50 (MQ=255) aCGCGCCGCCAGGGCAGTCGCAGCAGGCTCATCTCGGCGAGGTTGCGCTc                                                                                                          <  2:1031042/50‑1 (MQ=255)                     cagcagGCTCATCTCGGCGAGGTTGCGCTCAGGTCAGTCGCGTGGCCTGCGGTGGGGTCGGATCAGTGATGCGTGGCCACCGCCGGCTGGAATTTCTCCAGGCAGTAGCCAAGCCCGCGCACGGTGGCGATGCg  >  1:475875/1‑134 (MQ=255)                     |                                                                                                                                      ACGCGCCGCCAGGGCAGTCGCAGCAGGCTCATCTCGGCGAGGTTGCGCTCAGGTCAGTCGCGTGGCCTGCGGTGGGGTCGGATCAGTGATGCGTGGCCACCGCCGGCTGGAATTTCTCCAGGCAGTAGCCAAGCCCGCGCACGGTGGCGATGCG  >  AM260479/570477‑570630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑