Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ AM260480 633588 633660 73 4 [3] [2] 4 [fliR]–[fliQ] [fliR],[fliQ]

CGCGGGAATGCTCTGGAACACCTCGCGCATGTAGTCGACCATGGAATTGATCATCCACGGCCCCGCCAGC  >  AM260480/633660‑633729
 |                                                                    
cgcgGGAATGCTCTGGAACACCTCGCGCATGTAGTCGACCATGGAATTGATCATCCACGGccc         >  1:558643/1‑63 (MQ=255)
cgcgGGAATGCTCTGGAACACCTCGCGCATGTAGTCGACCATGGAATTGATCATCCACGGccc         <  2:558643/63‑1 (MQ=255)
 gcgGGAATGCTCTGGAACACCTCGCGCATGTAGTCGACCATGGAATTGATCATCCACGGCCCCGCCAGc  <  1:331161/69‑1 (MQ=255)
 gcgGGAATGCTCTGGAACACCTCGCGCATGTAGTCGACCATGGAATTGATCATCCACGGCCCCGCCAGc  >  2:331161/1‑69 (MQ=255)
 |                                                                    
CGCGGGAATGCTCTGGAACACCTCGCGCATGTAGTCGACCATGGAATTGATCATCCACGGCCCCGCCAGC  >  AM260480/633660‑633729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: