| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 1282088 = | 16 (0.620) | 3 (0.130) | 3/196 | 2.1 | 24.3% | coding (864/1896 nt) | edd1 | phosphogluconate dehydratase |
| ? | AM260479 | 1282173 = | 4 (0.170) | coding (949/1896 nt) | edd1 | phosphogluconate dehydratase | |||||
GGCGCGCGCCATCGCCACCAGGTGGATGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAATGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/1282175‑1282088‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcgcGCCGCGGGCATCGTCATCGACTGGAACGATTTCGACCTGCTGTCGCGCATCACGCCGCTGCTGGCGCGCGTCTACCCGAATGGCTCGGCCGATGTGAACCACTTCCATGCCGCGGGCGGCGCCGGTT > AM260479/1282173‑1282299 GGCGCGCGCCATCGCCACCAGGTGGATGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGACCTGCTGTCGC > 1:694414/1‑134 GCGCGCCATCGCCACCAGGTGGATGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGACCTGCTGTCGCGCA < 2:694414/134‑1 ATGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAAT > 1:103444/1‑56 ATGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAAT < 2:103444/56‑1 TGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAATGG < 1:928548/57‑1 TGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAATGG > 2:928548/1‑57 CCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGACCTGCTGTCGCGCATCACGCCGCTGCTGGCGCGCGTCTACCCGAATGGCTCGGC > 1:277399/1‑134 ATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGACCTGCTGTCGCGCATCACGCCGCTGCTGGCGCGCGTCTACCCGAATGGCTCGGCCGATGTGAACCACTTCCATGCCGCGGGCGGCGCCGG > 1:18491/1‑134 GCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGACCTGCTGTCGCGCATCACGCCGCTGCTGGCGCGCGTCTACCCGAATGGCTCGGCCGATGTGAACCACTTCCATGCCGCGGGCGGCGCCGGTT < 2:277399/133‑1 GGCGCGCGCCATCGCCACCAGGTGGATGGTGTGGTTGGTGGAGCCGCCGGTCGCCAGCAGGCCGACCATGGCGTTGGCAATGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/1282175‑1282088‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcgcGCCGCGGGCATCGTCATCGACTGGAACGATTTCGACCTGCTGTCGCGCATCACGCCGCTGCTGGCGCGCGTCTACCCGAATGGCTCGGCCGATGTGAACCACTTCCATGCCGCGGGCGGCGCCGGTT > AM260479/1282173‑1282299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |