New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AM260479 | 1282088 = | 16 (0.620) | 3 (0.130) | 3/196 | 2.1 | 24.3% | coding (864/1896 nt) | edd1 | phosphogluconate dehydratase |
? | AM260479 | 1282173 = | 4 (0.170) | coding (949/1896 nt) | edd1 | phosphogluconate dehydratase |
ACCTGCCGGGCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGA > AM260479/1281955‑1282207 | aCCTGCCGGGCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAg < 1:1022988/134‑1 (MQ=255) aaccggcgccgcccgcggcatggaagtggttcacatcggccgagccattcgggtagacgcgcgccagcagcggcgtgatgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcgcgcgc < 2:277399‑M1/6‑1 (MQ=255) ggCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCAt < 2:903529/134‑1 (MQ=255) ggCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCAt > 1:699105/1‑134 (MQ=255) ccggcgccgcccgcggcatggaagtggttcacatcggccgagccattcgggtagacgcgcgccagcagcggcgtgatgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCAt > 1:18491‑M1/126‑134 (MQ=255) gCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCaa > 2:833940/1‑134 (MQ=255) cTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACg > 2:67016/1‑134 (MQ=255) aGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCctgct > 2:984105/1‑134 (MQ=255) gccgagccattcgggtagacgcgcgccagcagcggcgtgatgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACcggcgg > 1:277399‑M1/90‑134 (MQ=255) gATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACcggcgg < 1:833940/134‑1 (MQ=255) aCCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTccacc < 2:38154/132‑1 (MQ=255) ccGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCaccaac < 2:699105/134‑1 (MQ=255) cgcgGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCaccaacc < 1:984105/134‑1 (MQ=255) aaCGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCAt < 2:1012192/127‑1 (MQ=255) aaCGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCAt > 1:1012192/1‑127 (MQ=255) tgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGgcgcgc < 2:694414‑M1/85‑1 (MQ=255) gcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGcgcc > 1:694414‑M1/47‑134 (MQ=255) tGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGAt > 1:549359/1‑134 (MQ=255) gcgcgcATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGAt < 1:978723/95‑1 (MQ=255) gcgcgcATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGAt > 2:978723/1‑95 (MQ=255) cgcATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGa > 2:987469/1‑134 (MQ=255) | ACCTGCCGGGCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGA > AM260479/1281955‑1282207 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |