New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM260479 1282088 =16 (0.620)3 (0.130) 3/196 2.1 24.3% coding (864/1896 nt) edd1 phosphogluconate dehydratase
?AM260479 1282173 = 4 (0.170)coding (949/1896 nt) edd1 phosphogluconate dehydratase

ACCTGCCGGGCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGA  >  AM260479/1281955‑1282207
                                                                                                                                     |                                                                                                                       
aCCTGCCGGGCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAg                                                                                                                         <  1:1022988/134‑1 (MQ=255)
      aaccggcgccgcccgcggcatggaagtggttcacatcggccgagccattcgggtagacgcgcgccagcagcggcgtgatgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcgcgcgc                                                                                                                    <  2:277399‑M1/6‑1 (MQ=255)
        ggCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCAt                                                                                                                 <  2:903529/134‑1 (MQ=255)
        ggCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCAt                                                                                                                 >  1:699105/1‑134 (MQ=255)
        ccggcgccgcccgcggcatggaagtggttcacatcggccgagccattcgggtagacgcgcgccagcagcggcgtgatgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCAt                                                                                                                 >  1:18491‑M1/126‑134 (MQ=255)
              gCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCaa                                                                                                           >  2:833940/1‑134 (MQ=255)
                cTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACg                                                                                                         >  2:67016/1‑134 (MQ=255)
                                aGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCctgct                                                                                         >  2:984105/1‑134 (MQ=255)
                                            gccgagccattcgggtagacgcgcgccagcagcggcgtgatgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACcggcgg                                                                             >  1:277399‑M1/90‑134 (MQ=255)
                                            gATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACcggcgg                                                                             <  1:833940/134‑1 (MQ=255)
                                                     aCCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTccacc                                                                      <  2:38154/132‑1 (MQ=255)
                                                      ccGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCaccaac                                                                   <  2:699105/134‑1 (MQ=255)
                                                       cgcgGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCaccaacc                                                                  <  1:984105/134‑1 (MQ=255)
                                                                     aaCGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCAt                                                           <  2:1012192/127‑1 (MQ=255)
                                                                     aaCGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCAt                                                           >  1:1012192/1‑127 (MQ=255)
                                                                                    tgcgcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGgcgcgc                                     <  2:694414‑M1/85‑1 (MQ=255)
                                                                                       gcgacagcaggtcgaaatcgttccagtcgatgacgatgcccgcggcGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGcgcc                                  >  1:694414‑M1/47‑134 (MQ=255)
                                                                                                                  tGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGAt       >  1:549359/1‑134 (MQ=255)
                                                                                                                    gcgcgcATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGAt                                            <  1:978723/95‑1 (MQ=255)
                                                                                                                    gcgcgcATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGAt                                            >  2:978723/1‑95 (MQ=255)
                                                                                                                       cgcATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGa  >  2:987469/1‑134 (MQ=255)
                                                                                                                                     |                                                                                                                       
ACCTGCCGGGCGCGGCCTTCGTGCACCCGGACAGCGGCCTGCGCGATGCGCTGACCGCGGCGGCCGCGCAACGCGCGATCGCCCTGCGCGCGCGCGGCGACGAATACCTGCCGCTGGCGCGCATCGTCGACGAGCGCGCCATTGCCAACGCCATGGTCGGCCTGCTGGCGACCGGCGGCTCCACCAACCACACCATCCACCTGGTGGCGATGGCGCGCGCCGCGGGCATCGTCATCGACTGGAACGATTTCGA  >  AM260479/1281955‑1282207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.