New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 2136628	13 (0.500)	5 (0.220)	5/190	1.6	30.7%	coding (295/1146 nt)	catB3	muconate cyclo‑isomerase
	?	AM260479	= 2136616	11 (0.480)					coding (283/1146 nt)	catB3	muconate cyclo‑isomerase

AGGCGACCACCATCGGTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/2136500‑2136628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccatggcgcCATGCACATTGGCCGCATCCTGGCCCAGCAGCGCCGGTGCAAGGTAGCTGTCGATGGTCAGCTTGATGCCCTCGGGGCTCTCGTCGCCGTAGGAAAGTCCACCGATGGTGGTCGCCT  <  AM260479/2136616‑2136500                                                                                                                                                                                                                                                        AGGCGACCACCATCGGTGGACTTTCCTCCGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCCATGC                                                                                                                  <  2:645013/134‑1               GGTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCCATGCACATTGGCCGCATC                                                                                                    <  2:872706/134‑1                            ACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCCATGCACATTGGCCGCATCCTGGACCAGCAGC                                                                                       >  2:969492/1‑134                                    GAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCCATGCACATTGGCCGCATCCTGGCCCAGCAGCGCCGGTGC                                                                               <  1:969492/134‑1                                                                                                                 GCATGGCGCCATGGCGCCATGCACATTGGCCGCATCCTGGCCCAGCAGCGCCGGTGCAAGGTAGCTGTCGATGGTCAGCTTGATGCCCTCGGGGCTCTCGTCGCCGTAGGAAAGTCCACCGATGGTGGTCGCCT  >  2:897052/1‑134                                                                                                                                                                                                                                                        AGGCGACCACCATCGGTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/2136500‑2136628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccatggcgcCATGCACATTGGCCGCATCCTGGCCCAGCAGCGCCGGTGCAAGGTAGCTGTCGATGGTCAGCTTGATGCCCTCGGGGCTCTCGTCGCCGTAGGAAAGTCCACCGATGGTGGTCGCCT  <  AM260479/2136616‑2136500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.