New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 2136628	13 (0.500)	5 (0.220)	5/190	1.6	30.7%	coding (295/1146 nt)	catB3	muconate cyclo‑isomerase
	?	AM260479	= 2136616	11 (0.480)					coding (283/1146 nt)	catB3	muconate cyclo‑isomerase

AGGCGACCACCATCGGTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCGGCGCTCGAGACCGCACTGCTGGACGCGCAGGGCAAGCGTCTCGGCGTGCCGCTGGCGACACTGCTGGGCGGCGCCGTGCGCG  >  AM260479/2136500‑2136751                                                                                                                                 |                                                                                                                            aggcgaCCACCATCGGTGGACTTTCCTCCGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCcatgc                                                                                                                        <  2:645013‑M1/134‑6 (MQ=255)             tCGGTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAg                                                                                                                  >  2:730418/1‑128 (MQ=255)             tCGGTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAg                                                                                                                  <  1:730418/128‑1 (MQ=255)               ggTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCcatgcacattggccgcatc                                                                                                          <  2:872706‑M1/134‑20 (MQ=255)                            aCGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCcatgcacattggccgcatcctggaccagcagc                                                                                             >  2:969492‑M1/1‑102 (MQ=255)                            aCGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTc                                                                                             >  2:483899/1‑134 (MQ=255)                                    gagaGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCcatgcacattggccgcatcctggcccagcagcgccggtgc                                                                                     <  1:969492‑M1/134‑41 (MQ=255)                                      gagCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCgg                                                                                   >  2:292732/1‑134 (MQ=255)                                      gagCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCgg                                                                                   >  1:374332/1‑134 (MQ=255)                                      gagCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCgg                                                                                   <  1:292732/134‑1 (MQ=255)                                              aGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCGGCGCTCgag                                                                           <  2:374332/134‑1 (MQ=255)                                                ggCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCGGCGCTCGAGAc                                                                         <  1:610509/134‑1 (MQ=255)                                                                    cAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAg                                                                                       >  2:167655/1‑100 (MQ=255)                                                                    cAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAg                                                                                       <  1:167655/100‑1 (MQ=255)                                                                                                            aaTGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCGGCGCTCGAGACCGCACTGCTGGACGCGCAGGGCAAGCGTCTCGGCGTGCCGCTGGCGACACTGCTGggcgg             <  1:483899/134‑1 (MQ=255)                                                                                                                 gCATGGCGCCATGGCGCcatgcacattggccgcatcctggcccagcagcgccggtgcaaggtagctgtcgatggtcagcttgatgccctcggggctctcgtcgccgtaggaaagtccaccgatggtggtcgcct        >  2:897052‑M1/1‑17 (MQ=255)                                                                                                                           atggcgcGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCGGCGCTCGAGACCGCACTGCTGGACGCGCAGGGCAAGCGTCTCGGCGTGCCGCTGGCGACACTGCTGGGCGGCGCCGTGcgcg  >  1:629025/1‑130 (MQ=255)                                                                                                                           atggcgcGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCGGCGCTCGAGACCGCACTGCTGGACGCGCAGGGCAAGCGTCTCGGCGTGCCGCTGGCGACACTGCTGGGCGGCGCCGTGcgcg  <  2:629025/130‑1 (MQ=255)                                                                                                                                 |                                                                                                                            AGGCGACCACCATCGGTGGACTTTCCTACGGCGACGAGAGCCCCGAGGGCATCAAGCTGACCATCGACAGCTACCTTGCACCGGCGCTGCTGGGCCAGGATGCGGCCAATGTGCATGGCGCCATGGCGCGCCTCGGCAAGGTCGCACGCGGTAACCGCTTCGCCAAGTCGGCGCTCGAGACCGCACTGCTGGACGCGCAGGGCAAGCGTCTCGGCGTGCCGCTGGCGACACTGCTGGGCGGCGCCGTGCGCG  >  AM260479/2136500‑2136751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.