| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 758904 = | 16 (0.580) | 4 (0.160) | 4/196 | 2.0 | 20.7% | coding (214/867 nt) | h16_B0679 | conserved hypothetical protein |
| ? | AM260480 | 758993 = | 16 (0.640) | coding (125/867 nt) | h16_B0679 | conserved hypothetical protein | |||||
CTTCCTGCCGCGCGCGCCGCAGCGTGAACTGGGACGCGACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/758947‑758904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACA > AM260480/758993‑759121 CTTCCTGCCGCGCGCGCCGCAGCGTGAACTGGGACGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGA < 1:728389/72‑1CTTCCTGCCGCGCGCGCCGCAGCGTGAACTGGGACGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGA > 2:728389/1‑72 CGCCGCAGCGTGAACTGGGACGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGC > 1:574252/1‑103 CGCCGCAGCGTGAACTGGGACGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGC < 2:574252/103‑1 GACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGA < 1:633983/134‑1 GACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGA < 2:561494/134‑1 GACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGA < 2:821962/134‑1 CCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACA < 1:448997/131‑1 CCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACA > 2:448997/1‑131 CTTCCTGCCGCGCGCGCCGCAGCGTGAACTGGGACGCGACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/758947‑758904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACA > AM260480/758993‑759121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |