New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	758904 =	16 (0.580)	4 (0.160)	4/196	2.0	20.7%	coding (214/867 nt)	h16_B0679	conserved hypothetical protein
	?	AM260480	758993 =	16 (0.640)					coding (125/867 nt)	h16_B0679	conserved hypothetical protein

CGGCAGCGGCACCGGCGGCATGAAGCCGCCGAGGGTGGGATGGCCGTCGCGTCCCAGTTCACGCTGCGGCGCGCGCGGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACA  >  AM260480/758863‑759121                                                                                                                                   |                                                                                                                                 cggcagcggcaCCGGCGGCATGAAGCCGCCGAGGGTGGGATGGCCGTCGCGTCCCAGTTCACGCTGCGGCGCGCGCGGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCgg                                                                                                                               <  1:140210/134‑1 (MQ=255)  ggcagcggcaCCGGCGGCATGAAGCCGCCGAGGGTGGGATGGCCGTCGCGTCCCAGTTCACGCTGCGGCGCGCGCGGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCggg                                                                                                                              <  2:879749/134‑1 (MQ=255)               gcggcATGAAGCCGCCGAGGGTGGGATGGCCGTCGCGTCCCAGTTCACGCTGCGGCGCGCGCGGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAg                                                                                                                 >  2:374745/1‑134 (MQ=255)                                                          ttCACGCTGCGGCGCGCGCGGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCgg                                                                      >  1:821962/1‑134 (MQ=255)                                                                     gcgcgcgcGGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCg                                                           >  1:262786/1‑134 (MQ=255)                                                                        cgcgcgGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTg                                                        >  2:633983/1‑134 (MQ=255)                                                                                 ggAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATc                                               >  2:250971/1‑134 (MQ=255)                                                                                       cttcctgccgcgcgcgccgcagcgtgaactgggacgcgacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGa                                                                                                       >  2:728389‑M2/45‑72 (MQ=255)                                                                                       cttcctgccgcgcgcgccgcagcgtgaactgggacgcgacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGa                                                                                                       <  1:728389‑M2/28‑1 (MQ=255)                                                                                             aGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCgg                                                                                                                               >  1:651457/1‑42 (MQ=255)                                                                                             aGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCgg                                                                                                                               <  2:651457/42‑1 (MQ=255)                                                                                              gTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGc                                  <  1:374745/134‑1 (MQ=255)                                                                                                  cacaGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGc                                  >  1:841848/1‑130 (MQ=255)                                                                                                  cacaGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGc                                  <  2:841848/130‑1 (MQ=255)                                                                                                  cacaGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTc                              >  1:830289/1‑134 (MQ=255)                                                                                                   acaGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCggg                                                                                                                              <  2:658229/37‑1 (MQ=255)                                                                                                   acaGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCggg                                                                                                                              >  1:658229/1‑37 (MQ=255)                                                                                                     cgccgcagcgtgaactgggacgcgacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGc                                                          <  2:574252‑M2/73‑1 (MQ=255)                                                                                                     cgccgcagcgtgaactgggacgcgacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGc                                                          >  1:574252‑M2/31‑103 (MQ=255)                                                                                                               gCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTg                 <  2:830289/134‑1 (MQ=255)                                                                                                                            gacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGa    <  2:561494‑M2/127‑1 (MQ=255)                                                                                                                            gacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGa    <  2:821962‑M2/127‑1 (MQ=255)                                                                                                                            gacggccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGa    <  1:633983‑M2/127‑1 (MQ=255)                                                                                                                                 ccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACa  <  1:448997‑M2/129‑1 (MQ=255)                                                                                                                                 ccTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACa  >  2:448997‑M2/3‑131 (MQ=255)                                                                                                                                   |                                                                                                                                 CGGCAGCGGCACCGGCGGCATGAAGCCGCCGAGGGTGGGATGGCCGTCGCGTCCCAGTTCACGCTGCGGCGCGCGCGGCAGGAAGTAGAGCCAGTGCCACAGCGGCGGCAGCGGGCCGGCGGCGACGGCCTCGGGGTCGAGGTCGAAGGTGGCGGCGAGGCCGATCACCGGTTCCGGCGACAGCGTTTCGGTGCGCGATTCGCTGCGGCCGATCCAGCCGCGCAGGCGTTCGAGTTCAGGAGTGGCGTCAGTCATGACA  >  AM260480/758863‑759121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.