New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2824906	9 (0.330)	4 (0.160)	4/198	2.0	24.8%	coding (1105/1584 nt)	h16_B2500	sulfite reductase [NADPH] flavoprotein alpha‑component
	?	AM260480	= 2824939	16 (0.630)					coding (1072/1584 nt)	h16_B2500	sulfite reductase [NADPH] flavoprotein alpha‑component

ATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/2824841‑2824906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggccgcCTGGGCCTGGCCTCCGGCTGGCTGACCGAACACGCGGCCGTGGGCACCCGCATCGCGCTGCGCATCCGCACCA  <  AM260480/2824939‑2824867                                                                                                                                             ATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCCTGGGCCTGGCCTCCGGCTGGCTGACCGAACACGCGG                                      >  1:543981/1‑103 ATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCCTGGGCCTGGCCTCCGGCTGGCTGACCGAACACGCGG                                      <  2:543981/103‑1                                                         CCACGGCCGCCTGGGCCTGGCCTCCGGCTGGCTGACCGAACACGCGGCCGTGGGCACCCGCATCGCGCTGCGCATCCGCACCA  >  1:453719/1‑83                                                         CCACGGCCGCCTGGGCCTGGCCTCCGGCTGGCTGACCGAACACGCGGCCGTGGGCACCCGCATCGCGCTGCGCATCCGCACCA  <  2:453719/83‑1                                                                                                                                             ATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/2824841‑2824906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggccgcCTGGGCCTGGCCTCCGGCTGGCTGACCGAACACGCGGCCGTGGGCACCCGCATCGCGCTGCGCATCCGCACCA  <  AM260480/2824939‑2824867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.