| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 2824906 | 9 (0.330) | 4 (0.160) | 4/198 | 2.0 | 24.8% | coding (1105/1584 nt) | h16_B2500 | sulfite reductase [NADPH] flavoprotein alpha‑component |
| ? | AM260480 | = 2824939 | 16 (0.630) | coding (1072/1584 nt) | h16_B2500 | sulfite reductase [NADPH] flavoprotein alpha‑component | |||||
GCCGACCAGGATCAGGGGCCGGTCATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGATCGAA > AM260480/2824817‑2825012 | gCCGACCAGGATCAGGGGCCGGTCATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCcgtcg < 1:603873/133‑1 (MQ=255) cGGTCATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCAc > 1:452610/1‑134 (MQ=255) aTCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCt < 1:199730/122‑1 (MQ=255) aTCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCt > 2:199730/1‑122 (MQ=255) gcggGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGt < 2:452610/134‑1 (MQ=255) ttgAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGccc < 2:956529/132‑1 (MQ=255) tGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGgcggccgtgg > 1:453719‑M2/1‑73 (MQ=255) tGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGgcggccgtgg < 2:453719‑M2/83‑11 (MQ=255) ccACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGAAGTTCGAGTTGCCCGt < 2:333634/93‑1 (MQ=255) ccACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGAAGTTCGAGTTGCCCGt > 1:333634/1‑93 (MQ=255) ccGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGgcggccgtgggcacccgcatcgcgctgcgcatccgcaccaaccgcagcttccacccgccggccgat > 1:543981‑M2/1‑37 (MQ=255) ccGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGgcggccgtgggcacccgcatcgcgctgcgcatccgcaccaaccgcagcttccacccgccggccgat < 2:543981‑M2/103‑67 (MQ=255) ttCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGAt < 1:564114/99‑1 (MQ=255) ttCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGAt > 2:564114/1‑99 (MQ=255) ttCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGATCGaa < 1:503112/103‑1 (MQ=255) ttCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGATCGaa > 1:681992/1‑103 (MQ=255) ttCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGATCGaa > 2:503112/1‑103 (MQ=255) ttCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGATCGaa < 2:681992/103‑1 (MQ=255) gccGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAgg < 2:136485/83‑1 (MQ=255) gccGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAgg > 1:136485/1‑83 (MQ=255) | GCCGACCAGGATCAGGGGCCGGTCATCGGCCGGCGGGTGGAAGCTGCGGTTGGTGCGGATGCGCAGCGCGATGCGGGTGCCCACGGCCGCGTGTTCGGTCAGCCAGCCGGAGGCCAGGCCCAGGCGGCCGTCGTCGTAGCGGGTCTGCCGCACCAGCAGTTCGAGTTGCCCGTCCCGCGGCAGCGAGGCGATCGAA > AM260480/2824817‑2825012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |