New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 2546841	14 (0.540)	5 (0.210)	3/200	2.2	23.8%	coding (840/1467 nt)	argAB	acetylglutamate kinase and acetyltransferase
	?	AM260479	= 2546916	19 (0.790)					coding (915/1467 nt)	argAB	acetylglutamate kinase and acetyltransferase

GATGGAAGACGTGGCCAGCGCCACCGCCACGGCGCTCAAGGCCGACAAGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGGCGCTCAAGGGCGGTGTGCCGCGTGCGCACCTGATCCCCTATTCGCTCGACGGTGC  >  AM260479/2546715‑2546963                                                                                                                               |                                                                                                                           gATGGAAGACGTGGCCAGCGCCACCGCCACGGCGCTCAAGGCCGACAAGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAgc                                                                                                                     >  1:139971/1‑134 (MQ=255) gATGGAAGACGTGGCCAGCGCCACCGCCACGGCGCTCAAGGCCGACAAGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAg                                                                                                                      <  2:510447/133‑1 (MQ=255)             ggCCAGCGCCACCGCCACGGCGCTCAAGGCCGACAAGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAaac                                                                                                          >  1:729227/1‑133 (MQ=255)              gCCAGCGCCACCGCCACGGCGCTCAAGGCCGACAAGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAaacaa                                                                                                        <  2:729227/134‑1 (MQ=255)                           ccacGGCGCTCAAGGCCGACAAGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGccgccg                                                                                           <  2:792882/134‑1 (MQ=255)                                               aaGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTg                                                                         >  1:293421/1‑132 (MQ=255)                                                 gCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTgcag                                                                      >  2:77940/1‑133 (MQ=255)                                                      tCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTg                                                                >  2:643976/1‑134 (MQ=255)                                                          catcaCCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTc                                                             <  2:139971/133‑1 (MQ=255)                                                               ccGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGgcg                                                       >  1:228951/1‑134 (MQ=255)                                                                cGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGgcgc                                                      <  1:643976/134‑1 (MQ=255)                                                                   ggTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCcttgagcgccttgaccaggtgctgcaggtagttggccacgtccggcggcagatggttgttttg                                                             >  1:628047‑M1/1‑61 (MQ=255)                                                                   ggTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCcttgagcgccttgaccaggtgctgcaggtagttggccacgtccggcggcagatggttgttttg                                                             <  2:103388‑M1/124‑64 (MQ=255)                                                                   ggTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCcttgagcgccttgaccaggtgctgcaggtagttggccacgtccggcggcagatggttgttttg                                                             <  2:628047‑M1/124‑64 (MQ=255)                                                                   ggTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCcttgagcgccttgaccaggtgctgcaggtagttggccacgtccggcggcagatggttgttttg                                                             >  1:103388‑M1/1‑61 (MQ=255)                                                                                 ccGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGGCGCTCAAGggcggtgcgcag                                     >  2:228951‑M2/1‑122 (MQ=255)                                                                                              cAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGGCGCTCAAGGGCGGTGTGCCGCGTGCGCACCTGa                        >  1:269648/1‑134 (MQ=255)                                                                                                          ggAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGGCGCTCAAGGGCGGTGTGCCGCGTGCGCACCTGATCCCCTATTCGc            >  2:502740/1‑134 (MQ=255)                                                                                                               tGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGGCGCTCAAGGGCGGTGTGCCGCGTGCGCACCTGATCCCCTATTCGCTCGAc       <  1:943598/134‑1 (MQ=255)                                                                                                                    cTGCGCACCGCCcttgagcgccttgaccaggtgctgcaggtagttggccacgtccggcggcagatggttgttttgcaggcgctccacggcggtgcgcagggacatttcctgcatcatcttgccgaccggatcgg  >  2:228951‑M1/1‑12 (MQ=255)                                                                                                                               |                                                                                                                           GATGGAAGACGTGGCCAGCGCCACCGCCACGGCGCTCAAGGCCGACAAGCTGATCTTCATCACCGAGGTGCCGGGCGTGCCCGATCCGGTCGGCAAGATGATGCAGGAAATGTCCCTGCGCACCGCCGTGGAGCGCCTGCAAAACAACCATCTGCCGCCGGACGTGGCCAACTACCTGCAGCACCTGGTCAAGGCGCTCAAGGGCGGTGTGCCGCGTGCGCACCTGATCCCCTATTCGCTCGACGGTGC  >  AM260479/2546715‑2546963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.