| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 150241 | 13 (0.500) | 4 (0.170) | 4/200 | 1.9 | 23.4% | coding (706/843 nt) | h16_A0136 | transcriptional regulator, BAF‑family |
| ? | AM260479 | = 150273 | 14 (0.580) | coding (738/843 nt) | h16_A0136 | transcriptional regulator, BAF‑family | |||||
CCGACAATACGCACGACGCCATTGCCGCGGGCTGCCTGGCCGCGCAGGCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACGCGATGGCGATGGCATCGGC > AM260479/150149‑150368 | ccGACAATACGCACGACGCCATTGCCGCGGGCTGCCTGGCCGCGCAGGCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTgcccgcgct > 2:404785‑M2/1‑125 (MQ=255) cACGACGCCATTGCCGCGGGCTGCCTGGCCGCGCAGGCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTgcccgcgctcgcccagcaca > 2:971321‑M2/1‑114 (MQ=255) ccATTGCCGCGGGCTGCCTGGCCGCGCAGGCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTc > 2:476651/1‑134 (MQ=255) gCCTGGCCGCGCAGGCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTc > 1:204749/1‑131 (MQ=255) ggCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATc < 2:204749/134‑1 (MQ=255) ggCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATc > 2:581517/1‑134 (MQ=255) tCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCgaga < 2:151819/111‑1 (MQ=255) tCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCgaga > 1:151819/1‑111 (MQ=255) gtgCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACgcgatggc > 1:958927/1‑134 (MQ=255) gggCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACGcgatggcgatgg > 1:54828/1‑134 (MQ=255) gCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTgcccgcgctcgcccagcacacgccaggtgcgttcgatggcgccggcctgcgcggc < 1:563077‑M2/99‑56 (MQ=255) gCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTgcccgcgctcgcccagcacacgccaggtgcgttcgatggcgccggcctgcgcggc > 2:563077‑M2/1‑44 (MQ=255) gCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACGCGATGGCGATGGCa < 2:964825/134‑1 (MQ=255) cgcgGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACGCGATGGCGATGGCATcggc < 1:903486/134‑1 (MQ=255) ccGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACGCGATGGCGATGGCATcggc < 1:782697/121‑1 (MQ=255) ccGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACGCGATGGCGATGGCATcggc > 2:782697/1‑121 (MQ=255) ctgTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCa > 1:558539/1‑86 (MQ=255) ctgTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCa < 2:558539/86‑1 (MQ=255) | CCGACAATACGCACGACGCCATTGCCGCGGGCTGCCTGGCCGCGCAGGCCGGCGCCATCGAACGCACCTGGCGTGTGCTGGGCGAGCGCGGGCCGGGCCCCGTGCGCTGCCTGCTGTCCGGCGGTGCCCGCGGCGCGCTGGCAGGCGCGCTCGCCGTGCCGTTCGAGATGCACGATAATCTGGTGCTGCTCGGCCTGCACGCGATGGCGATGGCATCGGC > AM260479/150149‑150368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |