New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	254557 =	22 (0.850)	5 (0.220)	5/192	1.6	20.5%	coding (228/453 nt)	h16_A0241	Uncharacterized protein, possibly involved in aromatic compounds catabolism
	?	AM260479	254640 =	19 (0.820)					coding (311/453 nt)	h16_A0241	Uncharacterized protein, possibly involved in aromatic compounds catabolism

ATGTGCATGGCGGCACGCTGATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTGGTGCCG  >  AM260479/254508‑254761                                                                                                                                     |                                                                                                                          aatgcaatgcgcgcgccgcggcgcaggcagcgcgcctccagcgtcagctcgccgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgatcacgccggtttccagcggcgcatgcgagcgcgcggcgAg                                                                                                                          <  2:891717‑M2/2‑1 (MQ=255)                    gATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGct                                                                                                       >  1:636177/1‑134 (MQ=255)                         cGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGctgcctg                                                                                                  >  2:846945/1‑134 (MQ=255)                                      cACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGgcgcgc                                                                                     >  1:331221/1‑134 (MQ=255)                                          cTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcat                                                                                 <  1:353124/134‑1 (MQ=255)                                          cTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcat                                                                                 <  2:331221/134‑1 (MQ=255)                                             aGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcattg                                                                               >  2:554112/1‑133 (MQ=255)                                                ctCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcattgcatt                                                                           <  2:891717‑M1/132‑1 (MQ=255)                                                 gcgcCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTc                                                                          >  2:9545/1‑134 (MQ=255)                                                     CGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCg                                                                      >  2:636177‑M1/1‑134 (MQ=255)                                                       cgcgctgccgccaggaaatgcgtggacatgtcgatcgtgatcacgccggtttccagcggcgcatgcgagcgcgcggcgAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTgcgag                                                                    >  1:233142‑M2/79‑134 (MQ=255)                                                                       gcTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGAtg                                                    <  1:846945/134‑1 (MQ=255)                                                                              aCCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCgg                                             <  1:891717/134‑1 (MQ=255)                                                                               gacatgtcgatcgtgatcacgccggtttccagcggcgcatgcgagcgcgcggcgAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCgg                                             <  2:233142‑M2/79‑1 (MQ=255)                                                                                         cACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGgtgt                                  >  2:931899/1‑134 (MQ=255)                                                                                                  cATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGgcgc                         <  1:554112/134‑1 (MQ=255)                                                                                                     gTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcattg                                                                               >  2:1017427/1‑77 (MQ=255)                                                                                                     gTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcattg                                                                               <  1:1017427/77‑1 (MQ=255)                                                                                                     gTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCggg                      >  2:300847/1‑134 (MQ=255)                                                                                                                    ggcggcAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGgcgcg                                                                                      >  2:410863/1‑55 (MQ=255)                                                                                                                    ggcggcAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGgcgcg                                                                                      <  1:410863/55‑1 (MQ=255)                                                                                                                    ggcggcAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTgg       >  2:262112/1‑134 (MQ=255)                                                                                                                    ggcggcAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTgg       >  2:333096/1‑134 (MQ=255)                                                                                                                        cgagcgcgcggcgAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGgcgcgc                                                                                     >  2:575200‑M2/14‑52 (MQ=255)                                                                                                                        cgagcgcgcggcgAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGgcgcgc                                                                                     <  1:575200‑M2/39‑1 (MQ=255)                                                                                                                         cAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTGGTGCCg  >  2:206530/1‑134 (MQ=255)                                                                                                                                     |                                                                                                                          ATGTGCATGGCGGCACGCTGATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTGGTGCCG  >  AM260479/254508‑254761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.