Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1206106	1206172	67	2 [0]	[0] 2	h16_A1108	conserved hypothetical protein

CAGGGCCGGCGCTGGCATCTTCGGCCGGCATATTGGCGCAGCCTG  >  AM260479/1206173‑1206217 |                                             cAGGGCCGGCGCTGGCATCTTCGGCCGGCATATTGGCGCAGCCTg  <  1:668493/45‑1 (MQ=255) cAGGGCCGGCGCTGGCATCTTCGGCCGGCATATTGGCGCAGCCTg  >  2:668493/1‑45 (MQ=255) |                                             CAGGGCCGGCGCTGGCATCTTCGGCCGGCATATTGGCGCAGCCTG  >  AM260479/1206173‑1206217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑