New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_1 443129 =304 (0.760)193 (0.530) 56/244 2.2 56.9% intergenic (+258/–) rasttk_feature_annotation_tool=annotate_proteins_si milarity/– Conserved hypothetical protein ArsC related/–
?AssemblyC74_contig_11 = 78782 0 (0.000)coding (62/66 nt) rasttk_feature_annotation_tool=elepa@bvbrc hypothetical protein

Only 100 of 212 total aligned reads displayed.

TCATAACTTATCATTTGTTATTTGTCAAGAACTTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACAACTCAGTTATCTTATCATGTCATTTCTAACATGTCAACAACTATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AssemblyC74_contig_1/443263‑443129
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATTATTATT  <  AssemblyC74_contig_11/78782‑78649
                                                                                                                                                                                                                                                                             
TCATAACTTATCATTTGTTATTTGTCAAGAACTTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACAACTCAGTTATCTTATCATGTCATTTCTAACATGTCAACAACTATTTT                                                                                                                                        >  2:2907191/1‑135
             TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAATTTTTTTAGA                                                                                                                          >  1:185768/1‑135
             TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGA                                                                                                                          >  1:3275644/1‑135
             TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGA                                                                                                                          >  1:904294/1‑135
             TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGA                                                                                                                          >  1:1717450/1‑135
             TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGA                                                                                                                          >  2:142952/1‑135
               TGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAA                                                                                                                         <  2:3323124/134‑1
               TGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAA                                                                                                                         <  2:1348462/134‑1
                  TATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGT                                                                                                                     >  2:2042027/1‑135
                  TATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGT                                                                                                                     >  1:1689403/1‑135
                   ATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTG                                                                                                                    <  1:2141761/135‑1
                   ATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGT                                                                                                                     <  1:2390283/134‑1
                     TTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGAT                                                                                                                  <  1:1543226/135‑1
                       GTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTA                                                                                                                            <  1:1155055/123‑1
                          AAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAAC                                                                                                             <  2:1714402/135‑1
                          AAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAAC                                                                                                             <  2:2064264/135‑1
                          AAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAAC                                                                                                             <  2:548280/135‑1
                          AAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAAC                                                                                                             <  2:904294/135‑1
                          AAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAA                                                                                                              <  2:1995611/134‑1
                                      TGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAG                                                                                                  <  1:1994243/135‑1
                                      TGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAAAATCCACTTCAG                                                                                                  >  2:1067613/1‑135
                                          GTTTTTTTCGCTAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAAAGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTATTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAAT                                                                                               <  2:179046/134‑1
                                          GTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAAT                                                                                               <  1:1034296/134‑1
                                          GTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAAT                                                                                               <  2:1847934/134‑1
                                             TTTTTCTATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCA                                                                                             <  2:3524943/133‑1
                                                 TCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTG                                                                                       <  2:2287007/135‑1
                                                       GAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAAT                                                                                 <  1:2440123/135‑1
                                                          TCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTA                                                                              <  1:2042027/135‑1
                                                           CAAGCTTCGCATGTGGTTCTTTTTTAAAGACTCAGTTATCTTATCATGTCTTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTAT                                                                             <  1:2789972/135‑1
                                                            AAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATC                                                                            <  1:3397957/135‑1
                                                                 tcgCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGT                                                                        <  2:1810256/131‑1
                                                                     AAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTC                                                                   >  2:1588664/1‑135
                                                                     AAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTC                                                                   >  2:2006414/1‑135
                                                                     AAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTC                                                                   >  1:2528481/1‑135
                                                                     AAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTC                                                                   >  1:2796308/1‑135
                                                                     AAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTC                                                                   >  2:860586/1‑135
                                                                     AAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATACACTTCAGAATCAAAGATGTTAAATTTATAATGTATTTC                                                                   >  2:2789972/1‑135
                                                                          gtaCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCC                                                               <  2:2146607/131‑1
                                                                          GTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCT                                                              <  2:850562/135‑1
                                                                            TCTTTTTTATCGACTCAGTTATGTTATCATGTCGTTTGTAACATGTCAATAACTTTTTTTTATTTTTTTTAGAAATGTGATATAACATCCACTTAAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:1176697/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCCTGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATAAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  1:438795/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:903988/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  1:410552/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:720296/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:1667266/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:3035387/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:1626976/134‑1
                                                                            TCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  1:2006414/134‑1
                                                                            TCTTTTTTAACGACTAAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:1964912/134‑1
                                                                            TCTTTTTTAAAGTCTCATTTATCTTATCATTTCGTTATTAACATGTAAATAACTATTTTTTAAATTTTTTAGAAATGTTATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             <  2:1459007/134‑1
                                                                             CTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCTAGTAGTTCTTCCTTG                                                            >  1:3305399/1‑134
                                                                                TTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCA                                                        <  2:2168500/135‑1
                                                                                TTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCA                                                        <  2:2796308/135‑1
                                                                                    AACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATACACTTAAGAATCAACGCTGTTAAATTTATAATGTATTTCTTCCTTGGTCAAATA                                                    >  2:1411305/1‑135
                                                                                     acgACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACTCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTAT                                                   <  2:2843248/132‑1
                                                                                       gACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAA                                                 <  1:2163812/134‑1
                                                                                       gACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAA                                                 <  2:2200924/134‑1
                                                                                           CAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTA                                             >  1:869840/1‑135
                                                                                                    TATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACT                                    >  1:3068480/1‑135
                                                                                                    TATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACT                                    >  2:2384877/1‑135
                                                                                                    TATCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACT                                    >  2:3423673/1‑135
                                                                                                      TCATGTCGTTAGTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTT                                  >  1:1511606/1‑135
                                                                                                              ttagTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATG                          >  2:603821/5‑135
                                                                                                              ttagTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATG                          >  1:731079/5‑135
                                                                                                              ttagTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTT                                                             >  1:1981415/5‑100
                                                                                                                agTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGAT                        >  1:2205607/3‑135
                                                                                                                 gTAACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATT                       <  1:1236248/134‑1
                                                                                                                   AACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTT                      >  1:3252746/1‑134
                                                                                                                   AACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTT                      >  2:437874/1‑134
                                                                                                                   AACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTT                      >  1:1079569/1‑134
                                                                                                                    ACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTT                    <  2:1689403/135‑1
                                                                                                                    ACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTT                    <  2:552099/135‑1
                                                                                                                    ACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTT                     <  2:1511606/134‑1
                                                                                                                    ACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTT                     <  2:3275644/134‑1
                                                                                                                    ACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTT                     <  1:588098/134‑1
                                                                                                                    ACATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTT                     <  1:2884051/134‑1
                                                                                                                     CATGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTC                   <  1:1588664/135‑1
                                                                                                                       TGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCG                  >  2:232406/1‑134
                                                                                                                       TGTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCG                  >  2:3458827/1‑134
                                                                                                                        GTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGAT                >  1:1424021/1‑135
                                                                                                                        GTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGAT                >  2:2423293/1‑135
                                                                                                                        GTCAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGAT                >  1:1805754/1‑135
                                                                                                                          CAATAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCA              >  1:1389160/1‑135
                                                                                                                           aatAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAA             >  1:2491845/4‑135
                                                                                                                           aatAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAA             >  2:2836896/4‑135
                                                                                                                           aatAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAA             >  2:2639447/4‑135
                                                                                                                           aatAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAA             >  1:2828673/4‑135
                                                                                                                           aatAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAA             >  1:2614611/4‑135
                                                                                                                           aatAACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCA                                                        <  2:3115234/89‑1
                                                                                                                               ACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGAT                >  2:382736/1‑128
                                                                                                                               ACTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGAT                <  1:382736/128‑1
                                                                                                                                CTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATT        <  2:2528481/135‑1
                                                                                                                                CTATTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATT        <  2:1402267/135‑1
                                                                                                                                   TTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTGTTATT     <  2:2712736/135‑1
                                                                                                                                   TTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATTATT     >  2:2482666/1‑135
                                                                                                                                   TTTTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATTATT     <  1:2760678/135‑1
                                                                                                                                     TTTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATTATTAT   <  1:2062131/135‑1
                                                                                                                                      TTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATTATTATT  >  1:2273455/1‑135
                                                                                                                                      TTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATC                                                                            >  2:153061/1‑61
                                                                                                                                      TTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCA                                                                                             <  1:1629974/44‑1
                                                                                                                                                                                                                                                                             
TCATAACTTATCATTTGTTATTTGTCAAGAACTTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACAACTCAGTTATCTTATCATGTCATTTCTAACATGTCAACAACTATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AssemblyC74_contig_1/443263‑443129
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttTTAAATTTTTTAGAAATGTGATATAACATCCACTTCAGAATCAACGCTGTTAAATTTATCATGTATTTCTTCCTTGGTCAACTATAAATTAAGCATTACTTTGTGAAATGATTTTTCGATCAATTATTATTATT  <  AssemblyC74_contig_11/78782‑78649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.