New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_1 443129 =304 (0.760)193 (0.530) 56/244 2.2 56.9% intergenic (+258/–) rasttk_feature_annotation_tool=annotate_proteins_si milarity/– Conserved hypothetical protein ArsC related/–
?AssemblyC74_contig_11 = 78782 0 (0.000)coding (62/66 nt) rasttk_feature_annotation_tool=elepa@bvbrc hypothetical protein

Only 100 of 212 total aligned reads displayed.

AATAATAATAATTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAT  >  AssemblyC74_contig_11/78649‑78787
                                                                                                                                     |                                                                                                                         
aataataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAA                                                                                                                         >  1:1573299‑M2/1‑134 (MQ=255)
aataataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAA                                                                                                                         >  1:2496023‑M2/1‑134 (MQ=255)
aataataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAA                                                                                                                         >  1:2391287‑M2/1‑134 (MQ=255)
 ataataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaa                                                                                                                         <  2:1048341‑M2/135‑3 (MQ=255)
  taataataatTGATCGTAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTataa                                                                                                                         <  1:1538913/134‑1 (MQ=255)
   aataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaa                                                                                                                       <  2:1805754‑M2/135‑5 (MQ=255)
   aataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaa                                                                                                                       <  1:1776910‑M2/135‑5 (MQ=255)
   aataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaa                                                                                                                       <  1:437874‑M2/135‑5 (MQ=255)
   aataataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaa                                                                                                                       <  1:279287‑M2/135‑5 (MQ=255)
      aataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatag                                                                                                                    >  1:224218‑M2/1‑128 (MQ=255)
      aataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatag                                                                                                                    <  2:224218‑M2/135‑8 (MQ=255)
      aataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatag                                                                                                                    <  2:185768‑M2/135‑8 (MQ=255)
       ataatTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGTAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagt                                                                                                                   >  2:279287‑M2/1‑127 (MQ=255)
           ttGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttatt                                                                                                               >  2:1245071‑M2/1‑123 (MQ=255)
           ttGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttatt                                                                                                               >  2:1714115‑M2/1‑123 (MQ=255)
           ttGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttatt                                                                                                               >  1:2048329‑M2/1‑123 (MQ=255)
           ttGATCGAAAAAACATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttatt                                                                                                               >  1:3269646‑M2/1‑123 (MQ=255)
            tGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattg                                                                                                              >  1:1389160‑M2/1‑122 (MQ=255)
             gATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattga                                                                                                             <  2:1424021‑M2/135‑15 (MQ=255)
              aTCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgac                                                                                                            >  1:2034537‑M2/1‑120 (MQ=255)
              aTCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgac                                                                                                            <  2:2199521‑M2/135‑16 (MQ=255)
              aTCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgac                                                                                                            >  1:1424021‑M2/1‑120 (MQ=255)
              aTCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgac                                                                                                            <  1:860586‑M2/135‑16 (MQ=255)
              aTCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagt                                                                                                                   >  2:382736‑M2/1‑120 (MQ=255)
                cGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgaca                                                                                                           >  2:3458827‑M2/1‑118 (MQ=255)
                 gAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatg                                                                                                         <  1:718799‑M2/135‑19 (MQ=255)
                  aaaaaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgt                                                                                                        <  2:552099‑M2/135‑20 (MQ=255)
                   aaaaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgt                                                                                                        <  2:3275644‑M2/134‑20 (MQ=255)
                    aaaTCATTTCACAAAGTAATTCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACCGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgtt                                                                                                       >  2:1558970‑M2/1‑114 (MQ=255)
                    aaaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgtt                                                                                                       >  2:2554926‑M2/1‑114 (MQ=255)
                    aaaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgtt                                                                                                       >  2:437874‑M2/1‑114 (MQ=255)
                    aaaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgtt                                                                                                       >  1:1079569‑M2/1‑114 (MQ=255)
                    aaaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgtt                                                                                                       >  1:213284‑M2/1‑114 (MQ=255)
                    aaaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgtt                                                                                                       >  1:2614602‑M2/1‑114 (MQ=255)
                     aaTCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttac                                                                                                     <  1:1236248‑M2/135‑23 (MQ=255)
                        cATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaa                                                                                                  >  2:603821‑M2/1‑110 (MQ=255)
                        cATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaa                                                                                                  >  1:1708581‑M2/1‑110 (MQ=255)
                        cATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaa                                                                                                  >  2:2700760‑M2/1‑110 (MQ=255)
                        cATATCACAACGCAAACCTTAATTTATAGTTGACCAACTCAGAAATACATGACAAATTTAACAGCTTTGATACTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaa                                                                                                  >  2:2729206‑M2/1‑110 (MQ=255)
                                aaaGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatga                                                                                          >  1:1511606‑M2/1‑102 (MQ=255)
                                  aGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgata                                                                                        >  2:3423673‑M2/1‑100 (MQ=255)
                                  aGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgata                                                                                        >  1:2786767‑M2/1‑100 (MQ=255)
                                  aGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgata                                                                                        >  2:2384953‑M2/1‑100 (MQ=255)
                                          ttAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataact                                                                                <  2:1407190‑M2/135‑44 (MQ=255)
                                               ttATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtc                                                                           <  2:2000019‑M2/135‑49 (MQ=255)
                                               ttATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttatt                                                                                                               <  1:2927429‑M2/99‑13 (MQ=255)
                                                      tGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttcttgacatgttactaacgacatgataagataactgagtcgttctaa                                                                    <  1:2675555‑M2/135‑56 (MQ=255)
                                                      tGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaa                                                                    <  2:2796332‑M2/135‑56 (MQ=255)
                                                      tGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatga                                                                                          <  2:214607‑M2/113‑34 (MQ=255)
                                                      tGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatga                                                                                          >  1:214607‑M2/1‑80 (MQ=255)
                                                      tGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttatt                                                                                                               <  2:3115234‑M2/92‑13 (MQ=255)
                                                           aaGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaaga                                                                <  2:1673825‑M2/134‑60 (MQ=255)
                                                           aaGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaaga                                                                <  2:3035387‑M2/134‑60 (MQ=255)
                                                           aaGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaaga                                                                <  2:1459172‑M2/134‑60 (MQ=255)
                                                           aaGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaaga                                                                <  2:720296‑M2/134‑60 (MQ=255)
                                                           aaGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaaga                                                                <  2:903988‑M2/134‑60 (MQ=255)
                                                           aaGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaaga                                                                <  1:3504819‑M2/134‑60 (MQ=255)
                                                           aaGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaa                                                                                                  <  2:1981415‑M2/100‑26 (MQ=255)
                                                            aGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaac                                                              <  2:850562‑M2/135‑62 (MQ=255)
                                                                agaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccact                                                          <  2:2523717‑M2/135‑66 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  2:2327624‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  1:1937050‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  1:2796332‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  1:3351217‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  2:860586‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  1:552099‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  2:2884051‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  2:1776910‑M2/1‑69 (MQ=255)
                                                                 gaaATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCAAATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         >  1:3241891‑M2/1‑69 (MQ=255)
                                                                            tAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttga                                              <  1:2482931‑M2/135‑78 (MQ=255)
                                                                                          ttGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATATAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaa                                    >  2:144805‑M2/1‑44 (MQ=255)
                                                                                           tGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaa                                 <  2:2044504‑M2/133‑91 (MQ=255)
                                                                                           tGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaa                                 <  2:2316035‑M2/133‑91 (MQ=255)
                                                                                           tGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatagaaaaa                                 <  2:3524943‑M2/133‑91 (MQ=255)
                                                                                           tGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccactt                                                         <  1:391515‑M2/109‑67 (MQ=255)
                                                                                           tGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAA                                                                                                                         >  2:1629974‑M2/1‑43 (MQ=255)
                                                                                             aTTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaac                              <  2:2439975‑M2/134‑94 (MQ=255)
                                                                                             aTTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaac                              <  2:2018811‑M2/134‑94 (MQ=255)
                                                                                             aTTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaac                              <  1:1034296‑M2/134‑94 (MQ=255)
                                                                                                cTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttca                          >  1:1810599‑M2/1‑38 (MQ=255)
                                                                                                cTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttca                          >  1:2843248‑M2/1‑38 (MQ=255)
                                                                                                cTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttca                          >  1:1626976‑M2/1‑38 (MQ=255)
                                                                                                           gTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaataaccacttgcgaatcttgattctatcgaaaaaaacttcaaaaaagttatg               <  2:1384528‑M2/135‑109 (MQ=255)
                                                                                                           gTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttctt               <  2:904294‑M2/135‑109 (MQ=255)
                                                                                                           gTTATATCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttctt               <  2:548280‑M2/135‑109 (MQ=255)
                                                                                                           gTTATATCAAATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttctt               >  2:1517368‑M2/1‑27 (MQ=255)
                                                                                                                 tCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaa         >  1:2351954‑M2/1‑21 (MQ=255)
                                                                                                                 tCACATTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaa         >  1:1985326‑M2/1‑21 (MQ=255)
                                                                                                                   acaTTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaata       >  1:2168500‑M2/1‑19 (MQ=255)
                                                                                                                   acaTTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaata       >  1:2000019‑M2/1‑19 (MQ=255)
                                                                                                                   acaTTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaata       >  1:1667266‑M2/1‑19 (MQ=255)
                                                                                                                   acaTTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaat        <  2:1612644‑M2/134‑116 (MQ=255)
                                                                                                                   acaTTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaat        <  2:2151085‑M2/134‑116 (MQ=255)
                                                                                                                     aTTTCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaataac     <  2:1819919‑M2/135‑119 (MQ=255)
                                                                                                                       ttCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaataaca    <  2:3323124‑M2/134‑120 (MQ=255)
                                                                                                                       ttCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaataaca    <  2:2840021‑M2/134‑120 (MQ=255)
                                                                                                                        tCTAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaataacaaa  >  1:904264‑M2/1‑14 (MQ=255)
                                                                                                                          tAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgacaaata       >  1:3276380‑M2/1‑12 (MQ=255)
                                                                                                                          tAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgac            <  1:1155055‑M2/123‑112 (MQ=255)
                                                                                                                          tAAAAAATTTAAaaaatagttattgacatgttactaacgacatgataagataactgagtcgttaaaaaagaaccacttgcgaagcttgattctatcgaaaaaaacttcaaaaaagttcttgac            >  2:1155055‑M2/1‑12 (MQ=255)
                                                                                                                                     |                                                                                                                         
AATAATAATAATTGATCGAAAAATCATTTCACAAAGTAATGCTTAATTTATAGTTGACCAAGGAAGAAATACATGATAAATTTAACAGCGTTGATTCTGAAGTGGATGTTATATCACATTTCTAAAAAATTTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAT  >  AssemblyC74_contig_11/78649‑78787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.