| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_1 | = 443528 | 11 (0.030) | 2376 (1.700) +C |
162/252 | 0.0 | 99.8% | intergenic (+657/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Conserved hypothetical protein ArsC related/– |
| ? | AssemblyC74_contig_39 | = 1643 | 0 (0.000) | intergenic (‑5/–) | rasttk_feature_creation_tool=RNA_reps_SSU_rRNA/– | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/– | |||||
Only 100 of 2393 total aligned reads displayed.
GATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/443395‑443529 | atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa > 1:2747584‑M1/1‑132 (MQ=255) atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa > 1:3548638‑M1/1‑132 (MQ=255) atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa > 1:1635907‑M1/1‑132 (MQ=255) aggaagTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCTcaa > 1:677478‑M1/3‑132 (MQ=255) aaGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATCTGCTAGCAAACAAATTGAGCTTAACAATCGcaagat > 1:2382368‑M1/1‑129 (MQ=255) gACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgtt > 2:1455417‑M1/1‑125 (MQ=255) gACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgtt > 2:1651034‑M1/1‑125 (MQ=255) tttGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaac > 2:455603‑M1/1‑120 (MQ=255) tttGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaac > 1:1000469‑M1/1‑120 (MQ=255) tttGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaac > 2:2774944‑M1/1‑120 (MQ=255) tGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaact > 1:966338‑M1/1‑119 (MQ=255) aaaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttt > 1:2784515‑M1/1‑116 (MQ=255) aaaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttt < 1:1510488‑M1/135‑20 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttt < 1:1305946‑M1/134‑20 (MQ=255) aaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttta < 1:1806114‑M1/135‑22 (MQ=255) aaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttt < 2:3092654‑M1/134‑20 (MQ=255) aaCAGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttta < 2:1392199‑M1/135‑22 (MQ=255) aCAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagag > 1:2312858‑M1/1‑108 (MQ=255) aaaGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagt > 2:190753‑M1/1‑107 (MQ=255) aaaGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtt > 1:2063662‑M1/1‑106 (MQ=255) aaGTAAGACAAACCAAATGTGTTGGGCGTCTTGATTCAATTCACGACAATAAACA‑TGTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcacgatagttcgaactttttattagagtat > 2:2189499‑M1/1‑105 (MQ=255) aGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg < 2:3548638‑M1/135‑32 (MQ=255) aGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg < 2:1838925‑M1/135‑32 (MQ=255) aaaCCAATGGTGTAGGGCGTCTTGATTCATTTCAATACATCAAACA‑TTTTTAACCAGCAAGCAATATGCTAGCATACAAATTGAGGTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctg < 2:321914‑M1/133‑38 (MQ=255) aaaCCAAATGTTTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctgg < 2:938518‑M1/134‑39 (MQ=255) aaaCCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctgg < 2:1321192‑M1/135‑39 (MQ=255) aaaCCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctgg < 1:2166061‑M1/134‑39 (MQ=255) aaaCCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctg < 1:3505546‑M1/133‑38 (MQ=255) aaaCCAAATGTGTAGGGCGTCTTGATTCAATACATGACAACAAACATTTTTTAACAAGCAAGCAATAAGCTAGCAAACAAATTGAGCTTAACAATCGtaagattcttcgaactatttatgagagtttgaacct > 2:3164793‑M1/1‑97 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCACGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:2976344‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:3376546‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcag > 1:908090‑M1/1‑92 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTCACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:1091122‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCACTATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:2049933‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGctagattgttcgaactttttatgagagtttgatactggctcag > 2:1230941‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:3015981‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:1587692‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:2930830‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:3354809‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:720368‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:649807‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttacgagagtttgatcctggctcag > 1:2631799‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGAGTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:2975725‑M1/1‑91 (MQ=255) aaaTGAGTAGGGCGTCTTGATTCAATACAATACAACAAACA‑TTTTAAACAAGCAAGCAATATGCTAGCAAACAAATTGAGATTAACAATCGcaagaatgttcgaacatattatgagatttttatcctggctcag > 2:1782206‑M1/1‑91 (MQ=255) aTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggac < 2:2119254‑M1/135‑47 (MQ=255) ggCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacga < 2:2934277‑M1/129‑49 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCCAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:1026620‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:2591324‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1865462‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc > 1:3440736‑M1/1‑78 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:2228512‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:2699967‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:1177229‑M1/134‑57 (MQ=255) cTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg < 2:2385897‑M1/107‑32 (MQ=255) ttGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg < 1:1429715‑M1/135‑61 (MQ=255) tGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg > 2:3484186‑M1/1‑74 (MQ=255) gATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 1:1743597‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 2:2843975‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 1:463868‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc > 2:2318346‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg < 1:3291855‑M1/104‑32 (MQ=255) attcaaGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaat < 1:1357257‑M1/135‑69 (MQ=255) attcaaGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 1:801552‑M1/1‑67 (MQ=255) aaGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaataca > 2:2258540‑M1/1‑63 (MQ=255) aaGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaataca > 1:1105872‑M1/1‑63 (MQ=255) acaacaAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgc > 1:2429925‑M1/1‑61 (MQ=255) aacaaacaTTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaa > 2:50758‑M1/1‑59 (MQ=255) aacaaacaTTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgactaatacatgcaa > 2:3260808‑M1/1‑59 (MQ=255) aacaaaca‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcgggacgaacgctggcggcg < 2:854306‑M1/118‑61 (MQ=255) aacaaaca‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaa > 2:409464‑M1/1‑58 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaa > 1:2012480‑M1/4‑53 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaa > 2:2504916‑M1/4‑53 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaa > 1:2577773‑M1/4‑53 (MQ=255) tAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttct < 2:3406190‑M1/135‑90 (MQ=255) agcaagcaATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttc < 2:1718356‑M1/135‑95 (MQ=255) agcaagcaATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttc < 1:3227862‑M1/135‑95 (MQ=255) gcaagcaaTATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttcc < 1:3098492‑M1/135‑96 (MQ=255) gcaagcaaTATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttcc < 2:585352‑M1/135‑96 (MQ=255) gcaagcaaTATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttcc < 1:195121‑M1/135‑96 (MQ=255) gCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagct > 1:1233584‑M1/1‑29 (MQ=255) tAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgc > 1:1050419‑M1/1‑27 (MQ=255) tAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgc > 1:2117291‑M1/1‑27 (MQ=255) gCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctcc < 1:3177740‑M1/135‑111 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccacc > 1:3025708‑M1/1‑22 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccacc > 2:2440026‑M1/1‑22 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccacc > 2:1527935‑M1/1‑22 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccacc > 1:544923‑M1/1‑22 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg < 1:406413‑M1/53‑32 (MQ=255) aaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccgga > 1:117982‑M1/1‑19 (MQ=255) aTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaa > 1:2866092‑M1/1‑17 (MQ=255) cTTAACAATCGcaagatttttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaa < 1:616699‑M1/134‑124 (MQ=255) cTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagag < 2:1614265‑M1/134‑124 (MQ=255) aCAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaagagtg < 1:864471‑M1/135‑129 (MQ=255) cAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtgg > 2:264221‑M1/1‑6 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggc < 2:1970933‑M1/135‑131 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggc < 2:771134‑M1/135‑131 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgactaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggc > 1:2499974‑M1/1‑5 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggac > 1:2676776‑M1/1‑5 (MQ=255) cGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaactcttctttttccaacggagcttgctccaccgtaaaaagaggagtggcgaa < 1:738303‑M1/135‑134 (MQ=255) cGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaagagtggcgaa < 1:1696038‑M1/135‑134 (MQ=255) | GATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/443395‑443529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |