| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_23 | = 9396 | 0 (0.000) | 257 (0.560) | 76/254 | 0.4 | 100% | intergenic (+36/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | DNA‑directed RNA polymerase beta subunit (EC 2.7.7.6)/– |
| ? | AssemblyC74_contig_49 | 1 = | 0 (0.000) | intergenic (–/‑111) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 263 total aligned reads displayed.
ATGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_23/9263‑9396 | atgaGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAt > 2:1984723/1‑134 (MQ=255)atgaGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAt > 1:1389234/1‑134 (MQ=255)atgaGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAt > 2:1568787/1‑134 (MQ=255)atgaGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAt > 2:1429427/1‑134 (MQ=255) tGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATa > 2:1163131‑M1/1‑133 (MQ=255) tGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATa > 2:2573453‑M1/1‑133 (MQ=255) tGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATa > 1:484730‑M1/1‑133 (MQ=255) tGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATa > 1:1964675‑M1/1‑133 (MQ=255) gAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATac < 2:3017573‑M1/134‑3 (MQ=255) cGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagtta > 1:1277081‑M1/1‑118 (MQ=255) cGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagtta > 2:3121289‑M1/1‑118 (MQ=255) ttGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaat > 2:364660‑M1/1‑116 (MQ=255) aaaGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATac > 2:2470923‑M1/1‑111 (MQ=255) aaaGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATac < 1:2470923‑M1/113‑3 (MQ=255) aaGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttt > 2:2847568‑M1/1‑110 (MQ=255) aaaaTTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctaga > 1:916387‑M1/1‑105 (MQ=255) aaTTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagagg < 1:1138861‑M1/135‑33 (MQ=255) tCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaa > 2:2888957‑M1/1‑100 (MQ=255) tCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaa > 2:694457‑M1/1‑100 (MQ=255) tCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaa > 1:1229462‑M1/1‑100 (MQ=255) aaTACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacat > 1:109141‑M1/1‑88 (MQ=255) aTTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaat > 2:2537036‑M1/1‑78 (MQ=255) gAATTTTACCAGGATAATGAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 2:3344634‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 1:2174727‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 1:215729‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 2:929959‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 2:1604648‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 1:3211313‑M1/1‑75 (MQ=255) ttttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa < 1:778026‑M1/135‑64 (MQ=255) ttttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa < 2:2174727‑M1/135‑64 (MQ=255) ttttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa < 2:1261731‑M1/135‑64 (MQ=255) ttttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa < 2:1868362‑M1/135‑64 (MQ=255) ttttACCAGGATAATAAGTGGAGTCGACGAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATCACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa < 2:839468‑M1/135‑64 (MQ=255) tttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaa < 1:1018944‑M1/135‑65 (MQ=255) tttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaa < 2:2283599‑M1/135‑65 (MQ=255) ttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaa < 2:1674283‑M1/135‑66 (MQ=255) tACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaa > 1:3447624‑M1/1‑69 (MQ=255) cAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaac < 1:2888957‑M1/135‑70 (MQ=255) taataaGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcata > 1:1748726‑M1/1‑61 (MQ=255) taataaGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcat < 1:2932602‑M1/134‑74 (MQ=255) aataaGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatat < 1:1604648‑M1/135‑76 (MQ=255) tCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaa > 2:2319928‑M1/1‑49 (MQ=255) tCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaa > 1:1504372‑M1/1‑49 (MQ=255) tCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctca < 2:3058563‑M1/134‑86 (MQ=255) cGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaa > 2:2917495‑M1/1‑48 (MQ=255) aCTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaa > 1:231589‑M1/1‑46 (MQ=255) aCTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaa > 2:1969110‑M1/1‑46 (MQ=255) aCTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaa > 1:2077621‑M1/1‑46 (MQ=255) aGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcc < 2:485982‑M1/135‑93 (MQ=255) gAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaaga < 1:2000039‑M1/135‑98 (MQ=255) aaCATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaa < 1:1349202‑M1/135‑99 (MQ=255) aCATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaa > 1:310313‑M1/1‑36 (MQ=255) cATTATCCAGCAATTTGTTCTAAAGTATATAACAGacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:2417853‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:2847568‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:978078‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:329870‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1337874‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1389234‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:749010‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:3176425‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1715471‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:2167822‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1837614‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:259681‑M1/135‑101 (MQ=255) cATTATACAGCAATATGAGCTATAGTATATAAGATccccgtggtgctagttaattttttcctagaggaatatgtctaaacatgttggtaaatcaaaaacaaaacgcatatagttgtctcaaaactcccaagaaat < 2:415937‑M1/135‑101 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcat > 1:2554484‑M1/1‑34 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 2:3211313‑M1/135‑103 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 2:1766924‑M1/135‑103 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 1:1568787‑M1/135‑103 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 1:3508993‑M1/135‑103 (MQ=255) ccAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggac > 1:181451‑M1/1‑29 (MQ=255) ccAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtatcaaaactcccaagaaatgaggac > 2:3157375‑M1/1‑29 (MQ=255) ccAGCAATATGAGCTAAAGTATATAACATacccgtggggctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggac > 1:424387‑M1/1‑29 (MQ=255) cAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:1580171‑M1/128‑101 (MQ=255) cAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat > 2:1580171‑M1/1‑28 (MQ=255) tatGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatat < 2:2932197‑M1/135‑114 (MQ=255) gAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaaga > 1:1856301‑M1/1‑19 (MQ=255) gAGCTAAAGTATATAACATacccgtggtgctagctaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 1:3151837‑M1/121‑103 (MQ=255) aGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgt < 2:2077621‑M1/135‑118 (MQ=255) gCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgtt > 2:2220450‑M1/1‑17 (MQ=255) aaGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatc > 1:2342420‑M1/1‑13 (MQ=255) aaGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatc < 1:2023979‑M1/135‑123 (MQ=255) aGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga > 1:3046157‑M1/1‑12 (MQ=255) atataACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 1:1697037‑M1/111‑103 (MQ=255) tataACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaat < 2:3163235‑M1/135‑128 (MQ=255) taACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagagatgaggactacatatgcgttcatcaaaatat < 1:2917495‑M1/135‑130 (MQ=255) taACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatat < 2:969929‑M1/135‑130 (MQ=255) taACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatat < 1:966310‑M1/135‑130 (MQ=255) taACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatat < 1:3333006‑M1/135‑130 (MQ=255) taACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatat < 1:2567742‑M1/135‑130 (MQ=255) taACATacacgtggtgctagttaattttttactagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatat < 2:1204908‑M1/135‑130 (MQ=255) tacATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaata > 2:1063574‑M1/2‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaata > 2:2694332‑M1/1‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaata > 2:1269109‑M1/1‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 2:2984648‑M1/107‑103 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga > 1:2984648‑M1/1‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:651203‑M1/105‑101 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat > 1:651203‑M1/1‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaaagcaaaaagtagtctcaaaacacccaagaaatgaggactacatatgcgttcatcaaaata > 1:265819‑M1/1‑5 (MQ=255) aCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaata > 1:696705‑M1/1‑4 (MQ=255) | ATGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_23/9263‑9396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |