| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | = 3396 | 0 (0.000) | 513 (0.410) +TGATGTT |
84/240 | 0.3 | 79.7% | noncoding (118/118 nt) | rasttk_feature_creation_tool=RNA_reps_5S_rRNA | 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation |
| ? | AssemblyC74_contig_8 | 1645 = | 277 (0.780) | intergenic (‑212/‑2) | rasttk_feature_creation_tool=tRNAscan‑SE/rasttk_feature_creation_tool=tRNAscan‑SE | tRNA‑Thr‑GGT/tRNA‑Asn‑GTT | |||||
Only 100 of 2112 total aligned reads displayed.
TAAAAGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3263‑3396 | aaGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaa < 2:2052565‑M1/135‑5 (MQ=255) aaGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaag > 1:2220268‑M2/1‑131 (MQ=255) aaCACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgtta < 2:189357‑M1/134‑9 (MQ=255) caccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcc < 2:314328‑M1/135‑12 (MQ=255) caccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaa > 2:338004‑M2/1‑124 (MQ=255) caccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaa > 2:1683402‑M2/1‑124 (MQ=255) caccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattc < 2:114486‑M1/135‑12 (MQ=255) accacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcca < 1:2079263‑M1/135‑13 (MQ=255) ccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccg < 2:3506951‑M1/135‑14 (MQ=255) ccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccg < 2:92226‑M1/135‑14 (MQ=255) cacaGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcca > 1:2380486‑M1/1‑121 (MQ=255) cacaGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagat > 2:629806‑M2/1‑121 (MQ=255) tgtgGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggt > 1:2747310‑M1/1‑116 (MQ=255) tggtggCGATAGCGAGCAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcata < 2:2556686‑M1/132‑19 (MQ=255) tggtggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggttt < 1:1801443‑M1/135‑22 (MQ=255) tggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttag > 2:1306603‑M1/1‑111 (MQ=255) tggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaa < 1:777089‑M2/135‑25 (MQ=255) gCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctc > 2:119048‑M1/1‑109 (MQ=255) cGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctc > 1:1699434‑M1/1‑108 (MQ=255) cGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctc > 1:233669‑M1/1‑108 (MQ=255) aTAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctc > 1:613981‑M1/1‑106 (MQ=255) aTAGCGAGAAGGAGACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttgg < 2:2842505‑M1/134‑29 (MQ=255) tAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttc < 2:1363503‑M2/135‑31 (MQ=255) aGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctg < 2:3436428‑M1/135‑32 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgg > 1:40981‑M1/1‑103 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttc < 2:2130290‑M2/133‑31 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatga > 2:944868‑M2/1‑103 (MQ=255) gagaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctggga > 2:1498242‑M1/1‑101 (MQ=255) gagaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtag > 1:695524‑M1/1‑101 (MQ=255) gaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatcttt < 1:2584881‑M2/135‑37 (MQ=255) aaGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcg < 1:1199769‑M1/134‑37 (MQ=255) tACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgaggttattccggcatagctcagttggtagtagcgcatga < 2:1801354‑M1/134‑42 (MQ=255) gTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaat < 2:2376275‑M1/135‑50 (MQ=255) tAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatc > 2:1745936‑M1/1‑85 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagc > 2:792180‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatg > 1:2930180‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatg > 1:949927‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgtta < 1:112785‑M1/90‑9 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaataagatgtagtagaaatagttcatctttttttgtttaaatcttt > 2:434476‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttt > 1:2881971‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttt > 2:1097693‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagt < 1:2479388‑M2/135‑54 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatg > 1:1505026‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcg < 2:2190568‑M1/118‑37 (MQ=255) aTGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagtta < 2:362468‑M2/135‑56 (MQ=255) gCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgt < 2:848091‑M1/135‑58 (MQ=255) cGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagg > 1:2137928‑M1/1‑76 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 2:2647491‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 2:1631611‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 1:550855‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 1:849636‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagct < 2:506403‑M1/100‑26 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcca < 2:2247939‑M1/87‑13 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgac > 1:1643660‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctatgt > 2:3094759‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagt > 2:2782004‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagt > 2:1568282‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagt > 1:2275614‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatctttt < 1:3229598‑M1/128‑54 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatctt < 1:3366163‑M1/126‑52 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgt > 2:2494494‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgat < 1:1998167‑M1/130‑56 (MQ=255) gTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcg < 1:1407401‑M1/135‑71 (MQ=255) ttAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcg > 1:3517869‑M1/1‑64 (MQ=255) aGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcc > 1:461902‑M1/1‑61 (MQ=255) cttAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgtta < 1:3307241‑M1/135‑80 (MQ=255) ccGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaat < 1:3094759‑M1/134‑86 (MQ=255) tGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgtaggttcgagtcctactgccggagtaaaagta < 2:2965019‑M1/135‑92 (MQ=255) gTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatga > 2:3330914‑M1/1‑43 (MQ=255) gTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcg > 1:920021‑M1/1‑43 (MQ=255) gTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcatttgctaagttgaactaatagagtcttttatgaatatcgaag > 1:1336352‑M1/1‑43 (MQ=255) gTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatgga < 1:2672880‑M2/135‑93 (MQ=255) gTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcat > 1:2804448‑M2/1‑43 (MQ=255) gggTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttag < 2:3034163‑M1/134‑100 (MQ=255) gggTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaag < 2:2440381‑M1/87‑53 (MQ=255) gggTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaatggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagttt > 2:565285‑M1/1‑35 (MQ=255) ccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagtt < 1:3273378‑M1/88‑62 (MQ=255) ccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagtt > 2:3273378‑M1/1‑27 (MQ=255) cTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcacctaac < 2:1955843‑M1/135‑110 (MQ=255) cTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaa < 1:17421‑M2/134‑109 (MQ=255) ttGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaagatcgaagttagtttttcacctaact < 2:2319764‑M1/135‑111 (MQ=255) tgtgAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtag > 2:271400‑M1/1‑24 (MQ=255) tgtgAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatccc < 1:3040481‑M1/99‑76 (MQ=255) tgAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagag > 2:2891982‑M1/1‑22 (MQ=255) tgAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcg < 1:3166242‑M2/134‑113 (MQ=255) gagaGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagc > 2:1427787‑M1/1‑21 (MQ=255) gagaGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcacctaacttcgt > 1:2992701‑M1/1‑21 (MQ=255) gagaGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcacctaacttcgt > 1:1578804‑M1/1‑21 (MQ=255) gagaGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaa > 1:1939046‑M2/1‑21 (MQ=255) agagTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagca < 2:123864‑M1/135‑116 (MQ=255) aGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatct > 1:1263969‑M1/1‑15 (MQ=255) aGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt < 1:1082473‑M1/75‑61 (MQ=255) gACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgact > 2:702405‑M1/1‑13 (MQ=255) gTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgca < 1:2435833‑M1/48‑39 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaatca > 1:1000511‑M1/1‑5 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctc > 2:1009979‑M1/1‑5 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagc > 1:1878057‑M1/1‑5 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagt < 2:3214972‑M2/102‑98 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttgtattaaggtaaagaacggattcaattgcagcggtcattttcaatggagaagtttttggtgcaaatcgttcgattactttgccat < 1:2516721‑M2/134‑130 (MQ=255) cGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcgttcgattactttgccatttc > 1:3461207‑M2/1‑3 (MQ=255) | TAAAAGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3263‑3396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |