| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_1 | 443402 = | 1145 (2.870) | 239 (0.670) | 65/254 | 1.3 | 29.4% | intergenic (+531/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Conserved hypothetical protein ArsC related/– |
| ? | AssemblyC74_contig_6 | = 168934 | 0 (0.000) | intergenic (+543/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)/– | |||||
Only 100 of 239 total aligned reads displayed.
ATAACAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_6/168801‑168934 | aaCAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATta < 1:1938635‑M2/134‑3 (MQ=255) aCAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtag < 1:578002‑M2/134‑4 (MQ=255) aCAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtag < 2:831134‑M2/134‑4 (MQ=255) aaTAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacc > 1:1292574‑M2/1‑129 (MQ=255) aaGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttg < 2:448629‑M2/135‑11 (MQ=255) aGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttga > 2:2974151‑M2/1‑124 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATTAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:640479‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:308494‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:2603836‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:2358472‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:1903492‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:3543095‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:2440627‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:2649043‑M2/1‑119 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 2:2056000‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:2805618‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 2:222173‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 2:555350‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:2425914‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:465004‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:517869‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact < 1:3181333‑M2/132‑17 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:3181333‑M2/1‑116 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACAGTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:2038717‑M2/135‑20 (MQ=255) aaTCAAGTCGCTGCTAATGAGTGTCAAAGACGTTTATAAAAAATAAACAAAGAAGTTGTTGACTTTCTATTCTGTATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaa > 1:1062057‑M2/1‑112 (MQ=255) cAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta > 2:517869‑M2/1‑109 (MQ=255) cAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta < 1:256614‑M2/135‑27 (MQ=255) cAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta < 1:2654161‑M2/135‑27 (MQ=255) aGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaa < 1:1586718‑M2/134‑28 (MQ=255) gctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagaca < 2:766192‑M2/134‑32 (MQ=255) gctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagaca < 2:2150759‑M2/134‑32 (MQ=255) ctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaa > 1:1694347‑M2/1‑102 (MQ=255) ctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaa > 1:2547547‑M2/1‑102 (MQ=255) ctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaa < 1:458544‑M2/134‑33 (MQ=255) gctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 1:766192‑M2/1‑100 (MQ=255) gctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 1:2315354‑M2/1‑100 (MQ=255) gctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 1:231039‑M2/1‑100 (MQ=255) aGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaaca < 1:1101244‑M2/114‑22 (MQ=255) aGTGGCAAAGACGGTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtg < 2:3324529‑M2/135‑43 (MQ=255) tGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgt > 1:3380822‑M2/1‑91 (MQ=255) gCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgta > 2:1568489‑M2/1‑89 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 2:2283174‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 2:1241377‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 2:1155432‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 2:279050‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 2:2918016‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 2:307544‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 1:1044706‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 1:555104‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 1:1549792‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgta > 2:1441104‑M2/1‑88 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCGGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 1:2781187‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGATGTTGACATTCTCTTCTGAATCTGAAAAGATTAAAGAGTTTTTGAAACAAAAAGATtagacctttgaaaaatcaacaaagtaagacaaaccaaaactgtaggg < 1:1617262‑M2/135‑48 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcg > 2:465004‑M2/1‑86 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggc < 1:1185272‑M2/134‑49 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggc < 2:91166‑M2/134‑49 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggc < 1:2933820‑M2/134‑49 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggc < 2:1870073‑M2/134‑49 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggc < 2:3005956‑M2/134‑49 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 2:1780935‑M2/1‑86 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac < 1:1780935‑M2/120‑35 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact < 2:2533190‑M2/102‑17 (MQ=255) gTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttg > 2:1016238‑M2/1‑81 (MQ=255) tAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgatt < 2:1237775‑M2/135‑58 (MQ=255) aaaaaaTAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaa < 1:938518‑M2/135‑61 (MQ=255) aaaCAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 2:2577528‑M2/1‑68 (MQ=255) aaCAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattctattcaagac < 1:2887335‑M2/135‑69 (MQ=255) cAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaa > 2:1472633‑M2/1‑65 (MQ=255) gttgACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatttgtagggcgtcttgattcaattcaagacaacaaacatttt > 1:658510‑M2/1‑55 (MQ=255) gttgACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttt > 1:2184212‑M2/1‑55 (MQ=255) gttgACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttt > 1:3324529‑M2/1‑55 (MQ=255) aCATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaac > 2:2007996‑M2/1‑51 (MQ=255) aCATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaac > 2:1849875‑M2/1‑51 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaa > 1:2433881‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaa > 1:3397841‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaaca > 2:2933820‑M2/1‑49 (MQ=255) tcttctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaa > 2:575828‑M2/1‑45 (MQ=255) cttctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaag < 1:1460371‑M2/135‑92 (MQ=255) cttctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacattttt > 1:2613556‑M2/1‑44 (MQ=255) cttctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacattttt < 2:2613556‑M2/125‑82 (MQ=255) cttctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaatgcaagacaacaaacatgtttaacaagcaag < 2:2700629‑M2/135‑92 (MQ=255) gATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctag > 1:1675807‑M2/1‑33 (MQ=255) aaGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:959226‑M2/1‑30 (MQ=255) gATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaac > 2:3463464‑M2/1‑28 (MQ=255) gATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaac > 1:2918016‑M2/1‑28 (MQ=255) gATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaac > 1:1241377‑M2/1‑28 (MQ=255) tAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaaca > 2:670933‑M2/1‑25 (MQ=255) gttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagctt > 1:3515908‑M2/1‑16 (MQ=255) gttgAAAAAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaaaaaatttgtagggcgtcttgattaaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagctt > 2:1307951‑M2/1‑16 (MQ=255) ttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaa < 2:3509817‑M2/135‑121 (MQ=255) ttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaa < 2:243318‑M2/135‑121 (MQ=255) ttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaa > 1:1155432‑M2/1‑15 (MQ=255) ttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaatagagcttaa < 2:86542‑M2/135‑121 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagtcaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 2:2872937‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 1:917969‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 1:1010828‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 1:212422‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 2:2469284‑M2/135‑122 (MQ=255) aaaaGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaac < 2:1079439‑M2/114‑108 (MQ=255) aaGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaacaatcgcaag < 2:1697277‑M2/135‑131 (MQ=255) | ATAACAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_6/168801‑168934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |