New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_43 992 =231 (0.660)560 (1.160) 92/254 0.0 82.9% coding (224/1215 nt) rasttk_feature_annotation_tool=annotate_proteins_km er_v2 hypothetical protein
?AssemblyC74_contig_61 = 423 0 (0.000)intergenic (‑1/–) rasttk_feature_annotation_tool=elepa@bvbrc/– hypothetical protein/–

Only 100 of 563 total aligned reads displayed.

GAGCCACAACCTTGGAACATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_61/289‑423
                                                                                                                                      |                                                                                                                                   
       aaCCTTGGAACATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccag                                                                                                                              <  1:2935191‑M2/135‑8 (MQ=255)
       aaCCTTGGAACATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccag                                                                                                                              <  1:1385471‑M2/135‑8 (MQ=255)
       aaCCTTGGAACATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccag                                                                                                                              <  2:582167‑M2/135‑8 (MQ=255)
       aaCCTTGGAACATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccag                                                                                                                              <  2:2340911‑M2/135‑8 (MQ=255)
           ttGGAACATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggc                                                                                                                          >  1:2294549‑M2/1‑124 (MQ=255)
                aCATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaa                                                                                                                      >  2:701249‑M2/1‑119 (MQ=255)
                      cAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttg                                                                                                               >  1:1515382‑M2/1‑113 (MQ=255)
                      cAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttg                                                                                                               >  2:2918368‑M2/1‑113 (MQ=255)
                      cAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagctt                                                                                                                <  1:3454001‑M2/134‑22 (MQ=255)
                      cAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagctt                                                                                                                <  2:2788463‑M2/134‑22 (MQ=255)
                      cAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagctt                                                                                                                <  2:2072044‑M2/134‑22 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  1:1070648‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  1:2461479‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  1:302138‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  2:1861250‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  2:2522195‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  2:2997735‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  2:362471‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgt                                                                                                              <  2:7531‑M2/135‑24 (MQ=255)
                       aGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttcc                                                                                                                                <  2:2416684‑M2/117‑6 (MQ=255)
                            tatCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaa                                                                                                           <  1:2419478‑M2/133‑27 (MQ=255)
                              tCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagcct                                                                                                       >  2:831756‑M2/1‑105 (MQ=255)
                                tGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttt                                                                                                     <  1:694602‑M2/135‑33 (MQ=255)
                                tGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttt                                                                                                     <  2:958090‑M2/135‑33 (MQ=255)
                                tGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagcct                                                                                                       >  1:1195629‑M2/1‑103 (MQ=255)
                                tGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagcct                                                                                                       <  2:1195629‑M2/133‑31 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  2:3434013‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  2:1779690‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:1789818‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  2:2472063‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  2:1517231‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:3241445‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:724023‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:2889904‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:2805240‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:1130457‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:2008566‑M2/1‑98 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaag                                                                                                 <  1:2253959‑M2/134‑37 (MQ=255)
                                     cATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaag                                                                                                 <  1:1581851‑M2/134‑37 (MQ=255)
                                      aTTCGACATATCAAACCTACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  2:2743051‑M2/1‑97 (MQ=255)
                                      aTTCGACATATCAAACCTACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                <  1:2743051‑M2/134‑38 (MQ=255)
                                      aTTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagtt                                                                                               <  1:1009289‑M2/135‑39 (MQ=255)
                                      aTTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagtt                                                                                               <  2:3372647‑M2/135‑39 (MQ=255)
                                          gACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaa                                                                                            <  2:2696913‑M2/134‑42 (MQ=255)
                                          gACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaa                                                                                            <  1:1695098‑M2/134‑42 (MQ=255)
                                          gACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaa                                                                                            <  1:2527522‑M2/134‑42 (MQ=255)
                                          gACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaa                                                                                            <  1:2358541‑M2/134‑42 (MQ=255)
                                           aCATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaagg                                                                                          >  1:2846781‑M2/1‑92 (MQ=255)
                                           aCATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaagg                                                                                          >  2:3467984‑M2/1‑92 (MQ=255)
                                           aCATATCAAACCCACGCAGATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaagg                                                                                          <  2:2001335‑M2/135‑44 (MQ=255)
                                             atatCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggca                                                                                        <  1:843085‑M2/135‑46 (MQ=255)
                                                  aaaCCCCCGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattaga                                                                                   >  2:885448‑M2/1‑85 (MQ=255)
                                                  aaaCCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattaga                                                                                   >  1:89261‑M2/1‑85 (MQ=255)
                                                  aaaCCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattaga                                                                                   >  1:619284‑M2/1‑85 (MQ=255)
                                                  aaaCCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattaga                                                                                   >  2:1428195‑M2/1‑85 (MQ=255)
                                                            atatCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgccttt                                                                         <  2:2441898‑M2/135‑61 (MQ=255)
                                                            atatCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgccttt                                                                         <  2:2625465‑M2/135‑61 (MQ=255)
                                                            atatCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgccttt                                                                         <  2:1712483‑M2/135‑61 (MQ=255)
                                                            atatCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattaga                                                                                   <  2:2852058‑M2/125‑51 (MQ=255)
                                                               tCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttaga                                                                      >  2:1902561‑M2/1‑72 (MQ=255)
                                                                 gATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagaga                                                                    <  2:222566‑M2/135‑66 (MQ=255)
                                                                 gATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggc                                                                                         <  2:1740522‑M2/114‑45 (MQ=255)
                                                                   tGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaa                                                                  <  2:3256096‑M2/135‑68 (MQ=255)
                                                                       tGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcg                                                               >  2:236848‑M2/1‑64 (MQ=255)
                                                                       tGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattg                                                               >  1:1752956‑M2/1‑64 (MQ=255)
                                                                         tAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgcta                                                            <  2:1609422‑M2/135‑74 (MQ=255)
                                                                                  cATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGTTCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttat                                                   <  1:1256095‑M2/135‑83 (MQ=255)
                                                                                  cATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttat                                                   <  1:477859‑M2/135‑83 (MQ=255)
                                                                                   aTCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattgctacaggtttatt                                                  <  2:1029672‑M2/135‑84 (MQ=255)
                                                                                   aTCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattgctacaggtttatt                                                  <  1:3513311‑M2/135‑84 (MQ=255)
                                                                                       cgGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttg                                              >  1:582167‑M2/1‑48 (MQ=255)
                                                                                       cgGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttg                                              >  1:1665557‑M2/1‑48 (MQ=255)
                                                                                       cgGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttg                                              >  1:3372647‑M2/1‑48 (MQ=255)
                                                                                          aaaaGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaa                                           <  2:3089468‑M2/135‑91 (MQ=255)
                                                                                             aGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattgctacaggtttatttttgaaagtg                                        >  1:14486‑M2/1‑42 (MQ=255)
                                                                                                  aaaCAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttgg                                   >  2:1385471‑M2/1‑37 (MQ=255)
                                                                                                    aCAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggta                                 >  2:1481832‑M2/1‑35 (MQ=255)
                                                                                                    aCAAGTTAGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggta                                 >  2:3218558‑M2/1‑35 (MQ=255)
                                                                                                           aGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggac                          <  1:2173962‑M2/135‑108 (MQ=255)
                                                                                                           aGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggac                          <  1:96890‑M2/135‑108 (MQ=255)
                                                                                                           aGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttgg                            >  2:646687‑M2/1‑28 (MQ=255)
                                                                                                           aGTGTCCAACACTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttgg                            >  1:1841703‑M2/1‑28 (MQ=255)
                                                                                                                   acacTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtct                  >  1:2696913‑M2/1‑20 (MQ=255)
                                                                                                                   acacTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtct                  >  1:1609422‑M2/1‑20 (MQ=255)
                                                                                                                   acacTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtct                  >  2:3324464‑M2/1‑20 (MQ=255)
                                                                                                                     acTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattaga                                                                                   >  2:425561‑M2/1‑18 (MQ=255)
                                                                                                                      cTTTGATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttat               >  1:1890829‑M2/1‑17 (MQ=255)
                                                                                                                          gATCTCTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttatcgcc           <  1:406812‑M2/135‑123 (MQ=255)
                                                                                                                          gATCTCTGTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttatcgcc           <  2:2255884‑M2/135‑123 (MQ=255)
                                                                                                                            tctcTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttatcgccgg         <  1:1960148‑M2/135‑125 (MQ=255)
                                                                                                                            tctcTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttat               >  2:164536‑M2/1‑11 (MQ=255)
                                                                                                                            tctcTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattgctacaggtttatttttgaaagtggttggtacttgaacattggtcttatcgccgg         <  1:3081686‑M2/135‑125 (MQ=255)
                                                                                                                            tctcTTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattgctacaggtttatttttgaaagtggttggtacttgaacattggtcttatcgccgg         <  1:3167760‑M2/135‑125 (MQ=255)
                                                                                                                             ctctTTGTTTgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattgctacaggtttatttttgaaagtggttggtacttgaacattggtcttatcgccgg         >  1:2581543‑M2/1‑10 (MQ=255)
                                                                                                                                  tgtttgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttatcgccggtatagt   >  1:3314392‑M2/1‑5 (MQ=255)
                                                                                                                                   gtttgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttatcgccggtatagtt  >  2:1070648‑M2/1‑4 (MQ=255)
                                                                                                                                   gtttgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtcttatcgccggtatagtt  >  1:3407994‑M2/1‑4 (MQ=255)
                                                                                                                                   gtttgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagaaattgctacaggtttatttttgaaagtggttggtacttgaacattggtcttatcgccggtatagtt  >  2:1270179‑M2/1‑4 (MQ=255)
                                                                                                                                   gtttgttccagtggcggaaaagcttgtcaagccttttaagt                                                                                                >  1:2099990‑M2/1‑4 (MQ=255)
                                                                                                                                    tttgttccagtggcggaaaagcttgtcaagccttttaagttcaaggcattagacattgcctttagagagatcgctacaggtttatttttgaaagtggttggtacttggacattggtctta                >  2:2929760‑M2/1‑3 (MQ=255)
                                                                                                                                      |                                                                                                                                   
GAGCCACAACCTTGGAACATATCAGTCATATCTGTAACATTCGACATATCAAACCCACGCATATCGATGGTTGTAACTTTTGCATCGCGGAAAAGTCCAAACAAGTTAGTGTCCAACACTTTGATCTCTTTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_61/289‑423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.