| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_49 | = 764 | 0 (0.000) | 138 (0.420) | 57/258 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– |
| ? | AssemblyC74_contig_59 | 1 = | 0 (0.000) | intergenic (–/‑31) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Transposase, IS4 | |||||
Only 100 of 138 total aligned reads displayed.
ACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/632‑764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > AssemblyC74_contig_59/1‑133 CAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCAT > 2:833330/1‑133 AATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTAC < 2:190960/135‑1 CGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCGAGGGGACAAAGGAGATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATGACTATA > 2:672339/1‑134 CCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTTCCCTTAAGGGCATTACTATATCCGT > 1:1895755/1‑134 CCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTT < 2:1903902/135‑1 CCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTACCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTT < 1:1128928/135‑1 CAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 1:2058999/135‑1 CAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 2:1935965/135‑1 CAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 1:1765032/135‑1 CAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 2:580764/135‑1 TGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGC > 1:1667288/1‑134 GTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCG < 1:2309362/132‑1 TCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCTTGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCAC > 1:2483287/1‑135 ATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTA > 1:971578/1‑135 GAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACAT > 1:817119/1‑135 GTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGAT > 1:1740967/1‑135 GTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGAT > 1:774190/1‑135 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATCTCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATCTCCGTTCCGCCACGTAAAAACATGGATAAATC < 2:2460992/135‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC < 1:191670/135‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAAT < 1:1633737/134‑1 GAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCA > 2:2262150/1‑135 GAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCA > 2:1324433/1‑135 GAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCA > 1:1238277/1‑135 ACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 1:1346140/133‑1 TTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAA < 2:647865/134‑1 TTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCACTTAAGGGCATTACTATATCCGTTCAGCCACGTAAAAACATGGATAAATCAGAAA < 2:1935185/134‑1 TTTATCGGAAGAAGCGAAACTTCCCAATATCCGAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTACAAACATGGATAAATCAGAAA < 2:284262/134‑1 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:2332247/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 2:1828502/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:1758579/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 2:2567364/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:1502520/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:1169240/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:1039452/1‑135 TCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGTATATATTAGCCATAAAATCCATTAAAAGCTTGCCCTTAAGGGCATTACTATATCAGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA < 2:2047652/135‑1 TCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA < 1:1195184/135‑1 TCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA < 1:833330/135‑1 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAGGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:2518550/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:1070578/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 2:844293/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:419215/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:2208667/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:1554199/1‑134 GGAAGAAGCGAATCTTCCCAAGATCCGAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGA < 2:1114299/135‑1 AAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGAC > 2:2352022/1‑134 ATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTAC > 2:352815/1‑135 AATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAA > 1:2192347/1‑135 TATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACA < 2:1260716/135‑1 TATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACA < 2:1260592/135‑1 CCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAG > 2:112743/1‑135 CCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAG > 1:2422362/1‑135 CTAGGGGACAAATGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGA < 2:1688873/135‑1 CTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGA < 2:794869/135‑1 AGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAA > 1:289921/1‑135 GGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTATACCACAGCTTACTTGGAAAACAAAGAAAAA > 1:2443319/1‑135 GGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAA > 2:157566/1‑135 GGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAA > 2:1890095/1‑135 GGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAAC > 2:1845636/1‑135 ACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAG > 2:2433674/1‑135 AAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGT < 2:1110224/134‑1 AAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTG > 2:2096956/1‑135 AGGATATATTATCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:448486/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGTCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:1285511/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGACAAACAGTTGA > 1:618824/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:1568665/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:1179059/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:1463955/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:943837/1‑135 GGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAG < 1:1469126/135‑1 ATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:764960/1‑132 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 2:1499580/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:386705/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:726856/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:1698935/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:2405822/1‑135 TAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTT > 2:1659877/1‑135 CATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTC > 1:2406023/1‑134 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:859681/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1380601/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:407673/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:364327/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:2328954/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:2105846/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:737499/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:2396992/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:221148/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:2127090/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:773392/1‑133 AAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCC < 1:29281/135‑1 AAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCAACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCT < 1:448486/135‑1 GAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAA > 1:2449083/1‑135 GAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAA > 1:1369638/1‑135 AAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAAT > 1:64872/1‑135 CCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCA > 2:1605582/1‑135 CTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAA > 1:1989384/1‑135 CTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAA > 1:1989484/1‑135 CTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAA > 1:2500657/1‑135 GGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > 2:35335/1‑135 GGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > 1:1501319/1‑135 GGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > 1:2165097/1‑135 ACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/632‑764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > AssemblyC74_contig_59/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |