| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_49 | = 764 | 0 (0.000) | 138 (0.420) | 57/258 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– |
| ? | AssemblyC74_contig_59 | 1 = | 0 (0.000) | intergenic (–/‑31) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Transposase, IS4 | |||||
Only 100 of 380 total aligned reads displayed.
TTACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/630‑764 | ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTCGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg < 1:974774/135‑1 (MQ=255)ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg > 1:583919/1‑135 (MQ=255)ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg < 2:842124/135‑1 (MQ=255)ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg < 1:315402/135‑1 (MQ=255) tACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGg > 2:17505‑M2/1‑134 (MQ=255) tACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGg > 2:2489626‑M2/1‑134 (MQ=255) cACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgtt > 2:123486‑M2/1‑126 (MQ=255) cACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgtt > 2:359241‑M2/1‑126 (MQ=255) cGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgc < 2:1711387‑M2/135‑12 (MQ=255) cAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAGGGGggttctgttgctaagtt < 2:2283380‑M2/135‑18 (MQ=255) cAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttc < 2:1935965‑M1/135‑18 (MQ=255) cAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttc < 1:1765032‑M1/135‑18 (MQ=255) cAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTAACGGAAGACGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATAATCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagtt < 1:26114‑M2/135‑18 (MQ=255) tgtCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaa < 2:1031371‑M2/135‑22 (MQ=255) tgtCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgc > 1:1667288‑M1/1‑114 (MQ=255) gtCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaa > 1:1548032‑M2/1‑113 (MQ=255) tCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCCTGCCCTTAAGGGggttctgttgcaaagttttaaat > 2:693864‑M2/1‑112 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaaga < 1:2023752‑M2/135‑29 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaaga < 1:882384‑M2/135‑29 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat > 1:1705884‑M2/1‑104 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat > 1:1417467‑M2/1‑104 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat > 1:1101349‑M2/1‑104 (MQ=255) gAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaa < 1:1003730‑M2/135‑34 (MQ=255) aGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaat < 1:1725059‑M2/134‑36 (MQ=255) gtgtTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaat < 2:299291‑M2/133‑36 (MQ=255) gtgtTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggat > 1:774190‑M1/1‑98 (MQ=255) ttAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccc > 1:1881699‑M2/1‑95 (MQ=255) ttAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCGAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccc > 2:2077164‑M2/1‑95 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatc < 1:191670‑M1/135‑43 (MQ=255) gagaCTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatca > 2:1324433‑M1/1‑92 (MQ=255) tttATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaa < 2:647865‑M1/134‑48 (MQ=255) tttATCGGAAGAAGCGAAACTTCCCAATATCCGAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtacaaacatggataaatcagaaa < 2:284262‑M1/134‑48 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctat < 2:1426736‑M2/135‑52 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaact > 2:2567364‑M1/1‑84 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaact > 2:1865677‑M1/1‑84 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaact > 1:1039452‑M1/1‑84 (MQ=255) tCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaacta < 1:1195184‑M1/135‑53 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 2:2185552‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 1:18031‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 2:867786‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 1:449424‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaacta > 1:1300597‑M1/1‑82 (MQ=255) ggAAGAAGCGAATCTTCCCAAGATCCGAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactaga < 2:1114299‑M1/135‑55 (MQ=255) gaagCGAATCTTCCCAATCTCCTAGGGGACAAGGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaa > 1:1640941‑M2/1‑77 (MQ=255) aagCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtagctatgattta < 1:2544909‑M2/133‑58 (MQ=255) aaTCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctg > 2:1142300‑M2/1‑71 (MQ=255) tCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggtttcc < 1:1282688‑M2/135‑70 (MQ=255) tCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTGATGGGggttctgttgcaatgttttaaataaagaataaattccctttcggtatctctgatttaagctgggattcc < 1:933114‑M2/135‑70 (MQ=255) aaTATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaa > 1:2192347‑M1/1‑62 (MQ=255) atCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataat > 2:1442414‑M2/1‑59 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:1909212‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:2013111‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:2544505‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:1185795‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:950221‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 1:134650‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataat < 2:577703‑M2/133‑77 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaag > 1:2422362‑M1/1‑57 (MQ=255) cTAGGGGACAAATGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaaga < 2:1688873‑M1/135‑80 (MQ=255) aGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatacctt < 2:2450901‑M2/135‑82 (MQ=255) gggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaa > 2:157566‑M1/1‑52 (MQ=255) gggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaa > 2:1890095‑M1/1‑52 (MQ=255) gACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgat < 1:822940‑M2/134‑85 (MQ=255) gACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgat < 2:1360969‑M2/134‑85 (MQ=255) aCAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac < 1:294204‑M2/127‑79 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg > 2:2338351/1‑45 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg < 1:2338351/45‑1 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:420970‑M2/1‑45 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac < 1:420970‑M2/123‑79 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctggg > 1:722563‑M2/1‑45 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttga > 1:1568665‑M1/1‑45 (MQ=255) atatatTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttga > 1:456037‑M1/1‑42 (MQ=255) atTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagacc > 2:1518951‑M2/1‑38 (MQ=255) ttAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttt > 1:386705‑M1/1‑37 (MQ=255) ttAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttt > 1:2405822‑M1/1‑37 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAGGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaaccc < 2:1070010‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaagccc < 2:2143351‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaaccc < 2:498108‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccctt < 2:772247‑M2/70‑41 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 2:819328‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 2:2396992‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:1380601‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:2328954‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:2232798‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:2105846‑M1/1‑30 (MQ=255) aaaTCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttcct < 1:1166705‑M1/135‑108 (MQ=255) tGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagt > 2:2109771‑M2/1‑21 (MQ=255) gAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaa > 1:2449083‑M1/1‑20 (MQ=255) aaaaGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaat > 1:64872‑M1/1‑19 (MQ=255) cccTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttc > 2:389414‑M2/1‑10 (MQ=255) cccTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttc > 1:738826‑M2/1‑10 (MQ=255) cccTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttc > 1:96132‑M2/1‑10 (MQ=255) ccTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaattaggttgtca > 2:1605582‑M1/1‑9 (MQ=255) cTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaattaggttgtcaa > 1:1989484‑M1/1‑8 (MQ=255) cTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaattaggttgtcaa > 1:2500657‑M1/1‑8 (MQ=255) aaGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgggtt > 2:18031‑M2/1‑5 (MQ=255) aaGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgggtt > 2:927968‑M2/1‑5 (MQ=255) gggggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgggtt < 1:1517015‑M2/133‑131 (MQ=255) ggcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaattaggttgtcaaaatttc > 1:2165097‑M1/1‑2 (MQ=255) ggcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaattaggttgtcaaaatttc > 1:1501319‑M1/1‑2 (MQ=255) | TTACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/630‑764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |