| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_19 | = 19031 | 0 (0.000) | 266 (0.700) | 78/256 | 0.3 | 100% | intergenic (+109/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Phage lysin, N‑acetylmuramoyl‑L‑alanine amidase (EC 3.5.1.28)/– |
| ? | AssemblyC74_contig_53 | = 622 | 0 (0.000) | coding (1/498 nt) | rasttk_feature_annotation_tool=annotate_proteins_si milarity | Mobile element protein | |||||
Only 100 of 266 total aligned reads displayed.
GTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_19/18898‑19031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTTGGAGGTGGCAA < AssemblyC74_contig_53/622‑492 GTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTT < 1:1971723/135‑1 ATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTC < 2:1225999/134‑1 TTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCA < 1:2885842/134‑1 CGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAAT > 2:238278/1‑135 GCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAAT > 1:454381/1‑134 CAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAA > 1:1356412/1‑135 AACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAAC > 2:556730/1‑135 CGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGA < 2:1598145/135‑1 CGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGA < 1:1631638/135‑1 CGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATAAATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGA < 1:1805614/135‑1 AAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGC < 2:149833/135‑1 CCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAAT < 1:1444776/134‑1 TCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATC < 1:2254292/135‑1 TCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATC < 2:1631483/135‑1 TCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATC < 1:1969550/135‑1 TCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGAATATTTAAATAACGAAGGCGGCTACAAATATC < 2:553435/135‑1 TGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTG > 1:2015170/1‑134 TGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAA < 2:1060231/135‑1 TGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAA > 2:2648368/1‑135 ACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACTAAGGCGGCTACAAATATCTTGCACAAAAATAT > 1:2132002/1‑135 ACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATAT > 2:1549993/1‑135 ACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATAT > 1:2183713/1‑135 CCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGG < 1:2834338/106‑1 CCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGG > 2:2834338/1‑106 ccaAAAAGTGAGACTAGAAATCTAATTAACAGGGGTGCTTTTTTTGCGGAAATATAAATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA < 2:1160521/132‑1 CCCACAAGTTAGAATAGAAATCTAATTAAACGCGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA < 1:2605785/135‑1 CCCAAAAGTTAGACTAGAAATCTAATTAAAATGGGTGCTTTTTTTGCGGAAATATAGAATTGTTTTTAAGAAATAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACACATATCTTGCACATAAATATCA < 2:119907/135‑1 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA < 2:1438394/135‑1 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA < 2:2552871/135‑1 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA < 2:2493350/135‑1 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA > 1:1299664/1‑135 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA > 2:1727448/1‑135 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA < 2:362696/135‑1 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA < 1:2734143/135‑1 CCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAAT > 2:179872/1‑131 AAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAAT < 1:1759914/135‑1 AAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGA < 1:970739/99‑1 AAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACAGTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAAT > 1:2202879/1‑135 AAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAA > 1:2704914/1‑135 AAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAA > 1:1068845/1‑135 AAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAA < 2:1143228/135‑1 AAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAA > 2:831114/1‑135 AAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAA > 1:2501429/1‑135 AGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAA > 1:1311092/1‑134 TTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATC > 2:246147/1‑135 AGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGT < 1:646544/135‑1 AGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGT < 2:1512077/135‑1 AGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGT < 2:369862/135‑1 AGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGT < 2:696986/135‑1 AGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGT < 2:862442/135‑1 AGACTAGAAATATAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGT < 1:1847799/135‑1 CTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTA > 2:725986/1‑133 CTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCA > 2:1304464/1‑122 AGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACT < 1:307860/135‑1 AGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACT < 2:1972598/135‑1 ATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTT > 2:227445/1‑135 TCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTA > 1:657650/1‑135 CTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAG < 2:2742890/135‑1 CTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAG < 1:1595598/135‑1 TAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGA < 1:396332/135‑1 TTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACAT > 2:1892248/1‑135 AAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTG < 1:1538693/135‑1 AAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGG < 2:425871/135‑1 AAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGG < 2:2271822/135‑1 AAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGG < 1:574099/135‑1 CTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATT > 2:1346838/1‑135 CTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATT < 1:1257261/135‑1 CTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATT < 1:2386398/135‑1 CTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATT < 1:2789572/135‑1 CTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATT > 1:780069/1‑135 TTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTT > 1:2227221/1‑135 TGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACT < 2:2138040/135‑1 CGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTAT > 2:1984201/1‑135 CGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTAT > 1:1449914/1‑135 GAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCA < 2:2290763/135‑1 GAAATATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATC < 1:366358/134‑1 ATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTT < 1:1006316/135‑1 ATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTT < 2:2056367/135‑1 ATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTT < 2:1356412/135‑1 ATACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTT < 1:689258/135‑1 TACATTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTG < 2:606129/135‑1 TTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTACATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAA < 2:2442044/135‑1 TTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAA < 1:1892248/135‑1 TTTGTTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAA < 2:2183713/135‑1 TTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTCTCATGGTTGGGAAGGCT > 1:828764/1‑135 TTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCT > 2:781463/1‑135 TTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCT > 1:418897/1‑135 TTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAA < 2:2712959/131‑1 TTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAG > 1:1563849/1‑94 TTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAG < 2:1563849/94‑1 TTTTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATC > 1:905985/1‑57 TTTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTG > 1:1227645/1‑135 TTAAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGG > 1:2301569/1‑135 AAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTT > 1:1721042/1‑135 AAGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGT > 1:879602/1‑78 AGAAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTTG < 2:2107857/135‑1 AAAAAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTTGGA > 2:918001/1‑135 AAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTTGGAGGT < 1:1984201/135‑1 AAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTTGGAGGT < 1:1727448/135‑1 AAAGTAGTTTCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTTGGAGGT < 1:1401712/135‑1 GTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_19/18898‑19031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGACTATTTAAATAACGAAGGCGGCTACAAATATCTTGCACATAAATATCAAATAAATCGTACACTGGTTAGACATTGGGTAAGGATTTATAACTATCATGGTTGGGAAGGCTTGGTTGGAGGTGGCAA < AssemblyC74_contig_53/622‑492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |