| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_49 | = 764 | 0 (0.000) | 182 (0.480) | 60/256 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– |
| ? | AssemblyC74_contig_59 | 1 = | 0 (0.000) | intergenic (–/‑31) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Transposase, IS4 | |||||
Only 100 of 182 total aligned reads displayed.
CTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/633‑764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > AssemblyC74_contig_59/1‑133 AATCACGAATCCAGGTGTCCATGACGTGAAATTGTTAGAGACTTTAACGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCAATGAAAAGCTTGCCCTTAAGGGCATTAC > 2:954417/1‑135 AATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTAC < 2:1406628/135‑1 AATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTAC < 1:218894/135‑1 CGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATA > 2:1029354/1‑134 CGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATA > 2:205926/1‑134 GAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCAAGAAAAGCTTGCCCTTAAGGGCATTACTATATC > 2:1352584/1‑135 CAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 2:2729625/135‑1 TCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCAC > 2:2904798/1‑135 ATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCCTTACTATATCCGTTCCGCCACGTc > 1:903791/1‑134 GACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAA > 2:1063215/1‑135 GACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAA < 1:1658675/135‑1 GACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAA > 1:164088/1‑135 ACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCAT < 2:1685656/109‑1 AGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGA > 2:2627642/1‑135 AGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGA > 1:2084757/1‑135 AGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGA > 1:185501/1‑135 GTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTCGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGAT > 2:2760785/1‑135 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC < 1:1020517/135‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC < 2:176085/135‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC < 2:438275/135‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC < 1:1966142/135‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAAT < 1:2627642/134‑1 GAGACTTTATCGGAAGAAGCTAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAACACATGGATAAATCA > 2:295592/1‑135 GAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACCAAGGATATATTAGCCATAAAATCCCTGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCGCGTAAAAACATGGATCTATCA > 2:871235/1‑135 ACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 2:2018478/133‑1 ACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 1:813023/133‑1 ACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 2:1221929/133‑1 ACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 2:1607469/133‑1 TTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAA < 1:1071523/134‑1 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 2:470469/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 2:2523644/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 2:2146058/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:542595/1‑135 TCGGAAGAAGCTAATATTCCCAATATCCTAGGGGACAAAGTATATATTAGCCATAAATTCCATGACAAGCTTGCCCTTAAGGGCATTTCTATATCCGTTCCGCCACGTAAAAACATGGATTAATCAGAAAAACTA < 2:2881470/135‑1 TCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA < 1:1276920/135‑1 TCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA < 1:2678556/135‑1 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:1196587/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:2595183/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 2:1047490/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 2:1884994/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCC < 2:2544924/100‑1 GCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGC > 1:1230666/1‑135 GCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG > 2:1246484/1‑118 TCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGG > 1:1341774/1‑135 CCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGA < 2:185501/135‑1 CCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGA < 2:1980988/135‑1 ATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGTATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAAC > 1:1468505/1‑135 TATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACA < 1:641863/135‑1 AGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAA < 1:1127111/135‑1 AGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAA < 1:250853/135‑1 GACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAATAAAAACA > 1:2852384/1‑135 AAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTT > 1:2644375/1‑135 AAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGT < 2:2721243/134‑1 AAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGT < 1:1633345/134‑1 AAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTG < 2:295/135‑1 AAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTG < 1:180975/135‑1 AGGATATATTAGCCATAAAATCCATGAAATGCTTGCCCTTAAGGGCATTACAATATCCGTTCCGCCACTTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTAGGAAAACAAAGAAAAACAGTTGA > 1:2537093/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCATAAAAACTATACCACAGCGTACTTGGAAAACAAAGAAAAACAGTTGA > 2:343481/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAATAAAAACAGTTGA > 1:2134698/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAACAACAGTTGA > 2:2390319/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:1532939/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:362913/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:2183645/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG > 1:170779/1‑89 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 2:170779/89‑1 ATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAATCAGTTGA > 2:802555/1‑132 ATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAA < 2:1647344/89‑1 ATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTAAATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAATAAAAACAGTTGAGACTGTT > 1:2735960/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 2:2044758/1‑135 TAAATTCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCTTTCCGCCACGTACAATCATGGATAAATCAGAAAAACTAGACCACGGCATACTTGGAAAACAAAGAAAAACAGTTGAGAGTGTTTTTTCT > 2:570975/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:2508456/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:105181/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1045672/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:1050583/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1386408/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:1518491/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:1491099/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:1436494/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1818625/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:2098430/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1094640/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:426945/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:392302/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:2524944/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:2695775/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGA < 2:717719/100‑1 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAA < 2:2093457/76‑1 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 1:329944/47‑1 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC > 2:329944/1‑47 AAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGTAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCT < 1:285863/135‑1 AAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCT < 2:1196587/135‑1 AAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCT > 1:1161700/1‑135 ATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC > 1:58558/1‑68 ATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC < 2:58558/68‑1 AAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATT < 1:190860/134‑1 TGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTT > 1:1484491/1‑134 AAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAAT < 1:1651842/135‑1 GGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTT > 2:1922549/1‑135 GGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > 1:48666/1‑135 GGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > 2:2219203/1‑135 CTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/633‑764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > AssemblyC74_contig_59/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |