| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_49 | = 764 | 0 (0.000) | 182 (0.480) | 60/256 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– |
| ? | AssemblyC74_contig_59 | 1 = | 0 (0.000) | intergenic (–/‑31) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Transposase, IS4 | |||||
Only 100 of 440 total aligned reads displayed.
TTACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/630‑764 | cAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGgg < 1:217998‑M2/132‑3 (MQ=255) cAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGgg < 1:1880567‑M2/132‑3 (MQ=255) cAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGgg < 2:1915943‑M2/132‑3 (MQ=255) cGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgc < 2:1634960‑M2/135‑12 (MQ=255) cGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactata > 2:924792‑M1/1‑124 (MQ=255) cGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATAAATTAGCCATAAAATCCATGAAAAGCTTGACCTTAAGGGcattactata > 2:1453186‑M1/1‑124 (MQ=255) gAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatc > 2:1958380‑M1/1‑123 (MQ=255) cAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttc < 1:228792‑M1/135‑18 (MQ=255) gtCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGTTATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaa > 2:1349908‑M2/1‑113 (MQ=255) gtCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaa > 2:1226106‑M2/1‑113 (MQ=255) tCCGTGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaa > 1:1125486‑M2/1‑112 (MQ=255) tCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaat < 2:2448618‑M2/135‑24 (MQ=255) tCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaa > 1:137931‑M2/1‑112 (MQ=255) tCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccac > 2:2005134‑M1/1‑112 (MQ=255) aTGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaa < 2:451142‑M2/135‑27 (MQ=255) aTGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaa < 2:782987‑M2/135‑27 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaaga < 1:1510279‑M2/135‑29 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaaga < 1:2092749‑M2/135‑29 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaaga < 1:2029529‑M2/135‑29 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaa > 2:2919005‑M1/1‑107 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaa > 2:1063215‑M1/1‑107 (MQ=255) aCGTGAAAGTGTTAGAGACTTTATCTGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGATTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaa < 2:2762350‑M2/135‑30 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaata < 1:2102834‑M2/135‑32 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat > 1:2616541‑M2/1‑104 (MQ=255) aGTGTTAGAGACTTTATCGGAAGAAGCGAATCTACCCAATATCCTAGGGGACAAAGGATATAATAGCCATAAAATCCATGAAAAGCTTGCCCTAAAGGGggttctgttgcaaagttttaaataaagaataaaat < 1:758621‑M2/134‑36 (MQ=255) ttAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccc > 2:1880567‑M2/1‑95 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatc < 1:1020517‑M1/135‑43 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatc < 2:1768507‑M1/135‑43 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatc < 1:2532658‑M1/135‑43 (MQ=255) gaCTTTATCGGAAGAAGCGAATCATCCCAAAAACCTAGGGGACAAAGGATATATTAGCCATAAAAACCATGAAAAGCTTGCCATTAAGGGggttctgttgcaaagtattaaataaagaataaaatcccttacggt < 2:141744‑M2/135‑46 (MQ=255) tttATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggta > 2:526006‑M2/1‑87 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAATCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctat < 1:1662088‑M2/135‑52 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctat > 2:1510279‑M2/1‑84 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccc < 2:1810772‑M2/122‑39 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaact > 2:2146058‑M1/1‑84 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaact > 1:484959‑M1/1‑84 (MQ=255) tCGGAAGAAGCTAATATTCCCAATATCCTAGGGGACAAAGTATATATTAGCCATAAATTCCATGACAAGCTTGCCCTTAAGGGcatttctatatccgttccgccacgtaaaaacatggattaatcagaaaaacta < 2:2881470‑M1/135‑53 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 1:905093‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 1:1167110‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaacta > 2:1047490‑M1/1‑82 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttcc > 1:2544924‑M1/1‑82 (MQ=255) cGGAAGAAGCGAATCTTCCCAAAATCCTAGGGGACAAAGGATATATTAGACATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 1:1580634‑M2/135‑54 (MQ=255) gCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcag < 1:1246484‑M1/118‑45 (MQ=255) aaTCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCCTGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctggg > 2:2069137‑M2/1‑71 (MQ=255) cAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccctt < 1:1643850‑M2/103‑41 (MQ=255) aaTATCCTCGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaat > 1:1209674‑M2/1‑62 (MQ=255) atatCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatgtataaatcagaaaaactagaccacagcttacttggaaaac > 1:1468505‑M1/1‑61 (MQ=255) tatCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaaca < 1:641863‑M1/135‑76 (MQ=255) tatCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaaca < 2:2665889‑M1/135‑76 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:69207‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 1:1101296‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:1652835‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:2709837‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaag > 1:1988854‑M1/1‑57 (MQ=255) gggACATAGGATATATTAGCAATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcatagtttttattaatgaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttga > 1:2846164‑M2/1‑52 (MQ=255) gggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttga < 2:2053512‑M2/135‑84 (MQ=255) gggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaa > 2:1386243‑M1/1‑52 (MQ=255) gACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagtttttaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttga > 1:533602‑M2/1‑50 (MQ=255) aCAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgattt < 1:1339727‑M2/135‑87 (MQ=255) aaaGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagtt > 1:2644375‑M1/1‑47 (MQ=255) aaGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcag > 2:420204‑M2/1‑46 (MQ=255) aaGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttg < 1:180975‑M1/135‑90 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac < 1:2907113‑M2/123‑79 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatg < 2:2819341‑M2/97‑53 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcataaaaactataccacagcgtacttggaaaacaaagaaaaacagttga > 2:343481‑M1/1‑45 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttga > 1:565655‑M1/1‑45 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcag < 2:170779‑M1/89‑45 (MQ=255) atTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagacc > 1:975741‑M2/1‑38 (MQ=255) atTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagacc > 1:392174‑M2/1‑38 (MQ=255) ttAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccg < 1:1302571‑M2/135‑99 (MQ=255) aGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgtttt > 1:2698771‑M1/1‑35 (MQ=255) tAAATTCCATGAAAAGCTTGCCCTTAAGGGcattactatatcctttccgccacgtacaatcatggataaatcagaaaaactagaccacggcatacttggaaaacaaagaaaaacagttgagagtgttttttct > 2:570975‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaaccc < 1:2215091‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggat > 1:2678294‑M2/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggagtcccaataataccttgatttcagtacagacc < 1:347328‑M2/127‑98 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctat < 2:1444559‑M2/81‑52 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:105181‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 2:819500‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:1818625‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 2:2513205‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 2:1154613‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:426945‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttgga > 1:717719‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaa < 2:2093457‑M1/76‑47 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttc > 2:329944‑M1/1‑30 (MQ=255) aaaTCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttcct < 2:1196587‑M1/135‑108 (MQ=255) aaaTCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttcct < 2:2599356‑M1/135‑108 (MQ=255) aaaTCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcgtacttggaaagcaaagaaaaacagttgagactgttttttcttcct > 2:2529062‑M1/1‑28 (MQ=255) aTCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaag < 1:842462‑M2/135‑110 (MQ=255) aTCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaag < 1:1421579‑M2/135‑110 (MQ=255) gAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaa > 1:1735966‑M1/1‑20 (MQ=255) cccTTAAGGGtgttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttaagtacagaccgaaaacccgaatagagtgccttcttttc > 1:2762350‑M2/1‑10 (MQ=255) cccTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttc > 2:235948‑M2/1‑10 (MQ=255) cccTGAAGGGggttctgttgcaaagttttaaataaacaataaaatcccttacggtatctatgatttaagctgtgattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttc > 2:2211884‑M2/1‑10 (MQ=255) ccTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcg < 1:106383‑M2/135‑127 (MQ=255) ccTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcg < 2:1835798‑M2/135‑127 (MQ=255) cTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgg < 2:735263‑M2/135‑128 (MQ=255) cTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgg < 2:1250897‑M2/135‑128 (MQ=255) aaGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgaattaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgggtt > 1:2467322‑M2/1‑5 (MQ=255) ggggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgggttttc < 1:2376117‑M2/135‑134 (MQ=255) | TTACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/630‑764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |