| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_1 | = 221 | 313 (1.000) | 200 (0.680) | 63/242 | 1.2 | 57.5% | intergenic (–/‑371) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Two‑component transcriptional response regulator, OmpR family |
| ? | AssemblyC74_contig_12 | 8 = | 0 (0.000) | intergenic (–/+152) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Polygalacturonase (EC 3.2.1.15) | |||||
Only 100 of 756 total aligned reads displayed.
AAGTTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATCACATGTGAAAGTCAATAAGAAAATGCTTATTTA > AssemblyC74_contig_1/86‑355 | agtttttttcgaTTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:38126‑M1/132‑1 (MQ=255)agtttttttcgaTTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:2549325‑M1/132‑1 (MQ=255)agtttttttcgaTTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 2:374530‑M1/132‑1 (MQ=255)agtttttttcgaTTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGACAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:1922547‑M1/132‑1 (MQ=255) gtttttttcgATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 1:1809047‑M1/133‑1 (MQ=255) agatttttcgaTTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTAACGTTTGTTATTTGTCACGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACT < 2:2410369‑M1/132‑1 (MQ=255) aGTTTTTTCTAGTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:2811355‑M1/135‑1 (MQ=255) aGTTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:1830359‑M1/135‑1 (MQ=255) aGTTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:1239249‑M1/135‑1 (MQ=255) aGTTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAGCGACT < 1:1001528‑M1/135‑1 (MQ=255) ttttCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGt < 1:2455011/135‑1 (MQ=255) gATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatctt < 2:1961193‑M1/135‑11 (MQ=255) aTTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATACCTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGttatctt < 2:1787101/135‑1 (MQ=255) aTTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGttatctt < 2:690122/135‑1 (MQ=255) aTTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGttatctt < 2:1117659/135‑1 (MQ=255) ttCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatc < 1:459691‑M1/135‑14 (MQ=255) tCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGttatcttatc < 1:1657177/135‑1 (MQ=255) tCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGttatcttatc < 1:305506/135‑1 (MQ=255) cGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCa < 2:2487033/135‑1 (MQ=255) cGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCAtt < 2:1550502/135‑1 (MQ=255) tcaGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgt < 2:2044554‑M1/134‑32 (MQ=255) aTTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGt > 2:74369/1‑112 (MQ=255) aTTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACta > 1:2849849/1‑134 (MQ=11) aTTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactctttt > 1:2026708‑M1/1‑94 (MQ=255) aTTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactctttt > 1:2238798‑M1/1‑94 (MQ=255) aTTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTAGAAGTTTTTTACGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatattatcacgtctaaaaacatgtgtcaactcattt > 2:47894‑M1/1‑94 (MQ=255) tttATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTa > 1:2608542/1‑135 (MQ=255) tATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTAtt > 1:282229/1‑135 (MQ=255) tCATAACTTATCGGTTGTTATTTGTCAAGAAGTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTGTTTTAACGACTCAGTTATCTTATCATGTCGTTCGTAACTTGTCAATAACTAttttt > 1:710298‑M1/1‑130 (MQ=255) cATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTAttttt < 2:2294850/135‑1 (MQ=255) cTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgt > 2:1032970‑M1/1‑124 (MQ=255) ttATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttca < 2:2141810‑M1/135‑54 (MQ=255) tATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgttt > 1:1622963‑M1/1‑122 (MQ=255) tATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgttt > 1:2646361‑M1/1‑122 (MQ=255) tATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcat > 2:1325697‑M1/1‑81 (MQ=255) tATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTattatt < 1:1132817/135‑1 (MQ=255) tATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTattatt < 2:144493/135‑1 (MQ=255) gTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaa > 2:1011347‑M1/1‑77 (MQ=255) gTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTtaat > 1:1990094/1‑135 (MQ=255) tttGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaa > 2:333325‑M1/1‑117 (MQ=255) tttGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTT > 1:514620‑M1/1‑117 (MQ=255) tATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaat > 1:1113202‑M1/1‑112 (MQ=255) tATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatttttc > 1:2679896‑M1/1‑71 (MQ=255) tATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttc > 2:290224‑M1/1‑71 (MQ=255) aTTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaat < 1:2312424‑M1/134‑24 (MQ=255) tttGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaaaatgtgtcaactcttttttggaattttcataaaatgtttcaa > 2:2715451‑M1/1‑69 (MQ=255) ttGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTg < 2:1913937/135‑1 (MQ=255) ttGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTg < 1:1875960/135‑1 (MQ=255) tGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatg < 1:2578514‑M1/135‑69 (MQ=255) gTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatatttt < 2:622715‑M1/135‑29 (MQ=255) tCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaa < 2:529176‑M1/135‑71 (MQ=255) aaGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttct < 1:424452‑M1/134‑31 (MQ=255) ttttttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgaca < 2:1647894‑M1/135‑79 (MQ=255) ttttttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgaca < 1:1528468‑M1/135‑79 (MQ=255) ttttttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgaca < 1:958780‑M1/135‑79 (MQ=255) ttttttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgaca < 2:787377‑M1/135‑79 (MQ=255) ttttttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgaca < 1:1269691‑M1/135‑79 (MQ=255) ttttttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgaca < 1:1325697‑M1/135‑79 (MQ=255) tttttGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGa < 2:2559/135‑1 (MQ=255) tttttGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGa < 2:1870911/135‑1 (MQ=255) tttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtctttt < 2:854864‑M1/135‑41 (MQ=255) tttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtctttt < 2:1290832‑M1/135‑41 (MQ=255) tttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtctttt < 2:2599619‑M1/135‑41 (MQ=255) tttGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtctttt < 2:1594667‑M1/135‑41 (MQ=255) aaGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggac < 1:1016578‑M1/135‑45 (MQ=255) gTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggaca < 1:588078‑M1/134‑46 (MQ=255) gTTTTTTTCGATAGAATCAAGATTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggaca < 1:1728912‑M1/134‑46 (MQ=255) tttttttCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggacaag > 1:1153514‑M1/1‑88 (MQ=255) ttCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaatcgcgacaacgttgtttaatat > 1:2515412‑M1/1‑42 (MQ=255) cGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAatatat < 2:926049/135‑1 (MQ=255) aGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCaa < 2:2081660/134‑1 (MQ=255) tCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACAt < 2:1386031/133‑1 (MQ=255) cAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATAAACATcaa > 1:2259616/1‑134 (MQ=255) cgcaagTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaag > 1:2745784‑M1/3‑24 (MQ=255) cgcaagGGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggacaagtaataatataccaactaaattt > 1:667047‑M1/3‑65 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggacaagtaataatataccaactaaatttatct > 2:2860590‑M1/1‑62 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggacaagtaataatataccaactaaatttagct > 2:1508922‑M1/1‑62 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggacaagtaataatataccaactaaatttagct > 2:2681567‑M1/1‑62 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggacaagtaataatataccaactaaatttagct > 2:2352333‑M1/1‑62 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTattatt > 1:2149033/1‑75 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATCACATGTGAAAGt > 1:156938/1‑135 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATCACATGTGAAAGt > 2:832138/1‑135 (MQ=255) aaGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATAACATGTGAAAGt > 1:831294/1‑135 (MQ=255) aaGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtc > 2:427321‑M1/1‑21 (MQ=255) aaGTGGTTC‑TTTTTAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtc > 1:1058807‑M1/1‑21 (MQ=255) ttCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATCACATGTGAAAGTCAATaa > 2:589428/1‑135 (MQ=255) tCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgtataaatattttcttctgtcttttggacaagtaataatataccaactaaatttagcttggtcaa > 1:1201352‑M1/1‑55 (MQ=255) tCTTTTTTAACGACTCAGTTATCTTATCATGTCGTTAGTAACATGTCAATAACTTttttgttatgtttttgaataaatattttcttctgtcttttggacaagtaataatatacaaactaaatttagcttggtcaa > 1:2081023‑M1/1‑55 (MQ=255) cTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAatat < 1:240765/106‑1 (MQ=255) cTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAAc > 1:2347341/1‑112 (MQ=255) ctttttaACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtcaagctaaa < 2:2887613‑M1/134‑123 (MQ=255) ctttttaACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtcaagctaaa < 1:1459445‑M1/134‑123 (MQ=255) tttttAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATCACATGTGAAAGTCAATAAGaaa > 2:2448316/1‑135 (MQ=255) tAACGTCTtagttatcttatcacttctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcattgaagcgcgacaaagttgtttaatatatcattaaaaaaaataatggtcaagctaaaatatt < 1:753471‑M1/135‑128 (MQ=255) tAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtcaagctaaaatatt < 2:2238798‑M1/135‑128 (MQ=255) tAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtcaagctaaaatatt < 2:1199879‑M1/135‑128 (MQ=255) tAACGACTtagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtcaagctaaaatatt < 1:1379621‑M1/135‑128 (MQ=255) tAACGACTtagttatcttatcaagtataaaaacatgtttcaactctttttttgaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtcaagctaaaatatt < 1:911311‑M1/135‑128 (MQ=255) ttagttatcttatcacgtctaaaaacatgtgtcaactcttttttggaattttcataaaatgtttcaatgaagcgcgacaacgttgtttaatatatcattaaaaaaaataaaggtcaagctaaaatattatttaag < 2:20092‑M1/135‑135 (MQ=255) tCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATCACATGTGAAAGTCAATAAGAAAATGCttattt < 2:2649785/134‑1 (MQ=255) | AAGTTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACTCAGTTATCTTATCATGTCATTTCCAACATGTCAACAACTTATTTTTTATTATTTAATAAGTTATTGGTGTTCTTTTGAACAAATAATAATATATCAACATCACATGTGAAAGTCAATAAGAAAATGCTTATTTA > AssemblyC74_contig_1/86‑355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |