| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_20 | 1 = | 0 (0.000) | 260 (0.640) | 63/256 | 1.3 | 100% | intergenic (–/+131) | –/rasttk_feature_annotation_tool=annotate_proteins_si milarity | –/Mobile element protein |
| ? | AssemblyC74_contig_57 | = 493 | 0 (0.000) | coding (1/492 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein | |||||
Only 100 of 260 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCATTGGTC > AssemblyC74_contig_20/1‑133 | atttcttttgacggataatgcctttggcatccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACtt < 2:821950‑M1/5‑1 (MQ=255) tttgacggataatgcctttggcatccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTc > 1:2387976‑M1/125‑135 (MQ=255) tttgacggataatgcctttggcatccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTc > 2:1829295‑M1/125‑135 (MQ=255) tttgacggataatgcatttggcatccacttcttgttatttaaattcatttgtatccttggtgattttctgatggctgatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTc > 1:2105216‑M1/125‑135 (MQ=255) ggataatgcctttggcatccacttaatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATaa > 1:604854‑M1/119‑134 (MQ=255) tttggcatccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatcctggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCg > 2:2822775‑M1/109‑135 (MQ=255) tttggcatccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCg > 2:1904753‑M1/109‑135 (MQ=255) tttggcatccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCg > 2:2052543‑M1/109‑135 (MQ=255) tttggaatccacttcatgttatttaaattcagttgtatccgtcgttattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCg > 1:1131162‑M1/109‑135 (MQ=255) gcatccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgctggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGt < 1:1790914‑M1/31‑1 (MQ=255) catccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg < 2:947766‑M1/32‑1 (MQ=255) catccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg < 2:2431263‑M1/32‑1 (MQ=255) catccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg < 2:2662527‑M1/32‑1 (MQ=255) catccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg < 1:2679994‑M1/32‑1 (MQ=255) catccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg < 1:740242‑M1/32‑1 (MQ=255) catccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg < 1:1024659‑M1/32‑1 (MQ=255) catccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg < 2:1549680‑M1/32‑1 (MQ=255) atccacttcagggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTg > 2:2255441‑M1/103‑134 (MQ=255) tccacttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAt > 1:1763970‑M1/102‑135 (MQ=255) tccacttcatggtatttaaagtcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAt > 2:2462536‑M1/102‑135 (MQ=255) ctcttctgggtttttaaattcagttgtatcggtcgtgattttctgttggcagatagtgttgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAttt > 1:2739654‑M1/100‑135 (MQ=255) cacttcatggtatttaaattctgttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAttt > 2:1313090‑M1/100‑135 (MQ=255) cacttcatggtatttaaagtcagttgtctccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAttt > 2:2374985‑M1/100‑135 (MQ=255) aacttcatggtttttaaattcagttgtatccgtcgtgattttctgatggcagatacgggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAttt > 1:532121‑M1/100‑135 (MQ=255) cttcatggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTa < 1:388301‑M1/37‑1 (MQ=255) atggtatttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCgt > 1:558980‑M1/94‑135 (MQ=255) atggtatttaaattcagtggtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgttttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCgt > 2:187285‑M1/94‑135 (MQ=255) atttaaattcagttgtatccgtcgtgattttctgatggtagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTc > 2:1948482‑M1/89‑99 (MQ=255) atttaaattcagttgtatccgtcgtgattttctgatggtagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTc < 1:1948482‑M1/11‑1 (MQ=255) tttaatttctgttgtatccgtcgtttttttcttttggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGc > 1:1901967‑M1/88‑135 (MQ=255) tttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGc > 2:896838‑M1/88‑135 (MQ=255) tttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGc > 1:1166740‑M1/88‑135 (MQ=255) tttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGc > 1:314494‑M1/88‑135 (MQ=255) tttaaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGc > 2:74000‑M1/88‑135 (MQ=255) aaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGc < 1:1834618‑M1/48‑1 (MQ=255) aaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGt < 1:2480198‑M1/51‑1 (MQ=255) aaattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGt < 1:1600699‑M1/51‑1 (MQ=255) aattcagttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGt < 1:1330891‑M1/51‑1 (MQ=255) ttgtatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTa < 1:2623830‑M1/59‑1 (MQ=255) tatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCg > 2:2032620‑M1/74‑100 (MQ=255) tatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCg < 1:2032618‑M1/27‑1 (MQ=255) tatccgtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAt > 2:326472‑M1/74‑107 (MQ=255) gtcgtgattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGc < 2:279030‑M1/67‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacggtggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 2:352920‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAt > 2:1631782‑M1/64‑97 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 1:788736‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 1:440457‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 2:164884‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 1:1483867‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 1:1508720‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 2:661773‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 2:517087‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 2:1161446‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 1:1986269‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGcttctt < 1:87768‑M1/72‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGct < 2:2353043‑M1/68‑1 (MQ=255) gattttctgatggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGGTACTTTTATTCCTAGcttctt < 2:2843615‑M1/72‑1 (MQ=255) attttctgatggcagatactggtgtataaacgacgatggatccgatttttggatactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTg > 2:2848105‑M1/63‑135 (MQ=255) ctgttggcagatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCaa > 2:814327‑M1/58‑135 (MQ=255) agatactggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTg < 1:2364401‑M1/84‑1 (MQ=255) ggtgtagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAActttctt > 1:86393‑M1/43‑135 (MQ=255) tagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTa < 2:201871‑M1/97‑1 (MQ=255) tagaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTa < 2:1038610‑M1/97‑1 (MQ=255) agaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTAt < 1:2291274‑M1/98‑1 (MQ=255) agaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTAt < 2:2885305‑M1/98‑1 (MQ=255) gaaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTAtt < 1:1522527‑M1/99‑1 (MQ=255) aaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGACCTTTCTTTTTATTg < 1:1145943‑M1/100‑1 (MQ=255) aaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTg < 1:1387338‑M1/100‑1 (MQ=255) aaacgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTg < 1:468267‑M1/100‑1 (MQ=255) acgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGAt < 2:1424869‑M1/102‑1 (MQ=255) cgacgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGAt < 2:1141521‑M1/34‑1 (MQ=255) acgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATaga < 2:1326240‑M1/105‑1 (MQ=255) acgatggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATaga < 1:398490‑M1/105‑1 (MQ=255) atggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAgaga < 2:1720702‑M1/107‑1 (MQ=255) atggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAgaga < 2:729471‑M1/107‑1 (MQ=255) atggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAgaga < 1:126171‑M1/107‑1 (MQ=255) ggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGaaa > 2:1181075‑M1/26‑134 (MQ=255) ggatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGaaa > 2:460700‑M1/26‑134 (MQ=255) gatccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGagaagc < 2:214673‑M1/110‑3 (MQ=255) tccgatttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACcg > 2:440457‑M1/23‑134 (MQ=255) atttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTAtt > 1:1066142‑M1/19‑79 (MQ=255) atttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGtt > 1:2557700‑M1/19‑135 (MQ=255) atttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGtt > 2:260714‑M1/19‑135 (MQ=255) atttttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGAGATGTACGCGTGTATGCCGTTACTTTTAGTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCgcgggt > 2:1002517‑M1/19‑133 (MQ=255) atttttggctactgctccAACATTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGtt > 2:1242610‑M1/19‑135 (MQ=255) tttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAACCCGCGGTTTCt < 1:1678925‑M1/120‑1 (MQ=255) tttggctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCt > 1:164884‑M1/16‑135 (MQ=255) gctactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGtt < 2:869536‑M1/117‑1 (MQ=255) ctactgctccAACTTTTCCTCGATAAGAATTGTAGCg > 1:1841626‑M1/11‑37 (MQ=255) tactgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTATCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTc < 1:2164501‑M1/126‑1 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCAtt > 2:60257‑M1/7‑135 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCAtt > 2:126171‑M1/7‑135 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCAtt > 2:779462‑M1/7‑135 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCAtt > 2:1063154‑M1/7‑135 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCAtt > 1:4950‑M1/7‑135 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCAtt > 1:2304263‑M1/7‑135 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCAtt > 1:352920‑M1/7‑135 (MQ=255) tgctccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGGTTCTTAGTTCAtt > 1:1181082‑M1/7‑135 (MQ=255) ccAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCATTGGTc > 2:1508720‑M1/3‑135 (MQ=255) cAACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAACCCGCGGTTTCTTAGTTCATTGGTc < 1:2755310‑M1/133‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTTCCTCGATAAGAATTGTAGCGACGTGATTTACGCGTGTATGCCGTTACTTTTATTCCTAGCTTCTTGATCAAGCGCTGAACTTTCTTTTTATTGATAGAGAAACCGCGGTTTCTTAGTTCATTGGTC > AssemblyC74_contig_20/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |