| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_20 | 1 = | 0 (0.000) | 260 (0.640) | 63/256 | 1.3 | 100% | intergenic (–/+131) | –/rasttk_feature_annotation_tool=annotate_proteins_si milarity | –/Mobile element protein |
| ? | AssemblyC74_contig_57 | = 493 | 0 (0.000) | coding (1/492 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein | |||||
Only 100 of 515 total aligned reads displayed.
ATACAATTTCTTTTGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_57/359‑493 | aCAATTTCTTTTGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTcc < 1:134438/133‑1 (MQ=255) aTTTCTTTTGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaactt > 2:2870759‑M2/1‑130 (MQ=255) tttGACGTAAAATGCCTTTGGCATCCACTTCATGTTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctc > 1:635426‑M2/1‑124 (MQ=255) tttGACGGATAATGCCTTTGGCATCCACTTCATGTTATTTAAATTCAGTTGTATCCGTCGTTATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctc > 1:1890668‑M2/1‑124 (MQ=255) tttGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctc > 2:860032‑M2/1‑124 (MQ=255) gACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgat > 2:2799724‑M2/1‑121 (MQ=255) gACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgat < 2:4950‑M2/135‑15 (MQ=255) ggATAATGCCTTTGGCATCCACTTAATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataa > 1:604854‑M2/1‑118 (MQ=255) ccTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtag > 1:701094‑M2/1‑110 (MQ=255) tttGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcg > 2:2052543‑M2/1‑108 (MQ=255) tGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgcc > 2:2450735‑M2/1‑106 (MQ=255) gCATCCACTTCATGTTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgt > 1:2257194‑M2/1‑104 (MQ=255) gCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGCTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgt < 1:1790914‑M2/135‑32 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgcagtg < 2:2493303‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgactggtcctcgataagaattgtagcgccgtg < 1:947922‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 2:2662527‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 1:740242‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 1:1024659‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 1:2679994‑M2/135‑33 (MQ=255) tCCACTTCATGGTATTTAAATTCCGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgat > 1:146291‑M2/1‑101 (MQ=255) tCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGTTGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgat > 1:2292369‑M2/1‑101 (MQ=255) tCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgat > 2:1958632‑M2/1‑101 (MQ=255) cACTTCATGGTATTTAAATTCTGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgattt > 2:1313090‑M2/1‑99 (MQ=255) cACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTTATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgattt > 1:212209‑M2/1‑99 (MQ=255) cACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgattt > 2:2208405‑M2/1‑99 (MQ=255) cACTTCAGGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACGGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgattt > 2:2314104‑M2/1‑99 (MQ=255) cTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgattta < 2:80768‑M2/134‑38 (MQ=255) ttCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacg < 2:1877592‑M2/135‑40 (MQ=255) tCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgt > 2:302251‑M2/1‑95 (MQ=255) aTGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgt > 2:2517741‑M2/1‑93 (MQ=255) ggTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgt < 2:739471‑M2/135‑45 (MQ=255) aTTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtat < 1:415091‑M2/134‑47 (MQ=255) tttAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgt > 2:829673‑M2/1‑87 (MQ=255) tttAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgt > 1:2758984‑M2/1‑87 (MQ=255) tttAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgt > 2:1408420‑M2/1‑87 (MQ=255) tttAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgt > 2:2844829‑M2/1‑87 (MQ=255) aaaTTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgt < 1:2788609‑M2/135‑52 (MQ=255) aaTTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgt < 1:1832770‑M2/134‑52 (MQ=255) ttGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttactttta < 1:1413701‑M2/135‑60 (MQ=255) ttGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttactttta < 2:337060‑M2/135‑60 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttctt < 2:2126185‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttctt < 2:681444‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgat > 2:1715084‑M2/1‑63 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtag < 2:644459‑M2/88‑26 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 1:1063154‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 1:1510546‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 2:164884‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 1:1986269‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 1:87768‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 1:460700‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGAGTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgtgacttttattcctagcttctt < 2:2074627‑M2/135‑73 (MQ=255) aTTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttg > 2:542776‑M2/1‑62 (MQ=255) aGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgacgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcagtcgctg < 2:57675‑M2/133‑85 (MQ=255) gtAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttt > 1:54554‑M2/1‑39 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttcttttta < 1:2843766‑M2/135‑98 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttcttttta < 1:788737‑M2/135‑98 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttatt < 2:2785952‑M2/99‑62 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttcttttta < 2:1014002‑M2/135‑98 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttcttttta < 1:2731172‑M2/135‑98 (MQ=255) aaaCGACGATGGATCCGATTTTTGGCTACTGCTCCgacttggcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattg < 2:2405601‑M2/135‑101 (MQ=255) acgacgATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattttagcgccgtgatttacgtgtgtatgtctttacttttattcctagcttcttgatcaggcgctgaactttcttattattgat < 1:2325988‑M2/135‑103 (MQ=255) acgacgATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgat < 1:1934794‑M2/67‑35 (MQ=255) cgtagatggaTCCGATTTTTGGCTACTGCTCCgacttttcctcgtttagtattgtagcgccgtgatttacgtgtgtatgtagttactttttttcctagcttcttgatcaggcgctgaactttctttttattgata > 1:820361‑M2/5‑32 (MQ=255) cgacgaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgata < 2:2021442‑M2/135‑104 (MQ=255) cgacgaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgata < 2:1179123‑M2/135‑104 (MQ=255) acgaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgataga < 2:77578‑M2/135‑106 (MQ=255) acgaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgataga > 2:2822881‑M2/1‑30 (MQ=255) acgaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgagaga < 1:1737710‑M2/135‑106 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagag < 2:2741098‑M2/134‑107 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagag < 1:354341‑M2/134‑107 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcacgcgctgaactttctttttattgatagaga < 1:157253‑M2/135‑108 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagaga < 2:925644‑M2/135‑108 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagaga < 1:2354104‑M2/135‑108 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttatggatagaga < 1:1156861‑M2/135‑108 (MQ=255) aTGGATCCTATATTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttatggatagaga < 2:2369861‑M2/134‑108 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagaga < 1:2033270‑M2/134‑108 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagaga < 1:126171‑M2/134‑108 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgtgacttttattcctagcttcttgatcacgcgctgaacgttcttttgattgatagaga < 2:2619189‑M2/134‑108 (MQ=255) ggATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaac > 2:1842194‑M2/1‑25 (MQ=255) ggATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaac > 2:1811914‑M2/1‑25 (MQ=255) tCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccg > 2:440457‑M2/1‑22 (MQ=255) aTTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtt > 1:1121606‑M2/1‑18 (MQ=255) aTTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtt > 1:2557700‑M2/1‑18 (MQ=255) aTTTTTGGCTACTGCTCCaacatttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtt > 2:1242610‑M2/1‑18 (MQ=255) tttGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaacccgcggtttct < 1:1678925‑M2/135‑121 (MQ=255) gCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagt > 2:382044‑M2/1‑11 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 1:2180893‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 1:1603092‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 1:2637124‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 2:1146443‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 2:1900938‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcgggttcttagttcatt > 1:398315‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagtattgtagcgacgtgatttacgcgtgtatgcggttacttttattcctagcttcttgataaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttgatt > 2:1594274‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 1:2411407‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 1:517087‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 2:1063154‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 2:147793‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 2:227007‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcgggttcttagttcatt > 1:1181082‑M2/1‑6 (MQ=255) ccaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcattggtc > 2:1510546‑M2/1‑2 (MQ=255) | ATACAATTTCTTTTGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_57/359‑493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |