| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_24 | 1 = | 0 (0.000) | 135 (0.780) +CTGATGTATCCGTGCTATCACTTGTGGTAGAGGTAGTATCTGTACTGTCGCTTGAAG |
49/142 | 0.2 | 100% | coding (1/420 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | AssemblyC74_contig_7 | = 152772 | 0 (0.000) | intergenic (+1/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | hypothetical protein/– | |||||
Only 100 of 570 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGATGGCACGGACACGTCAGCTTCAAGCGACAGTACGGA > AssemblyC74_contig_24/1‑133 | cattggtacttatacgacagacacaagctacattactgatacatctaccacatgttatagctcagattcatcaactacaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTc > 1:313877‑M1/132‑135 (MQ=255)caatggtacagatacgacagacacaagcgacagtacagatacatctaccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTc < 1:1148086‑M1/4‑1 (MQ=255) tgttacatatactacacacacaagcgacagtacagatacatataccacaagtgatagctcagattcataaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAg > 1:393946‑M1/129‑135 (MQ=255) tggtacagatactacagacacaagcgacagtacagatacatctaccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAg > 2:1341911‑M1/129‑135 (MQ=255) tggtacagatacgacagacacaagcgacagtacagatacatctaccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAg > 2:1708438‑M1/129‑135 (MQ=255) gtaacagatacgacatacaaaagcgacagtacagatacatctaccacaagtgatagctcatattcatcaacttcaagcgacagtacagatactacctctaccacacgtgatagcacggatacatcagCTTCAAGc > 2:157988‑M1/128‑135 (MQ=255) ctgatacgacatacacaagcgacagtacagatacatctaccacaagttatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACa > 2:937074‑M1/124‑135 (MQ=255) ataaccgacagacccacgcgacagtacacatacatctaccacacgtgatagctcagatacatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACa > 1:857273‑M1/123‑134 (MQ=255) agatacgacagacacaagcgactgtacagatacatctaccacaagtgatagctccgattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACa > 2:2792160‑M1/123‑134 (MQ=255) acgacagacacaagcgacagtacagatacatctaccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACa > 1:1705099‑M1/119‑135 (MQ=255) accgacacaagcgacagtacagatacatataccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGAt > 2:2873862‑M1/116‑135 (MQ=255) acacacacacgcgacagtacatatacatctaccacatgtgatagctcatattcataaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGAt > 1:1565666‑M1/116‑135 (MQ=255) cagacacaagcgacagtacagatacatctaccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGa < 1:2800474‑M1/19‑1 (MQ=255) gacacaagcgacagtacagatacatctaccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAg > 1:2098310‑M1/113‑119 (MQ=255) gacacaagcgacagtacagatacatctaccacaagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGAtac < 1:2362694‑M1/22‑1 (MQ=255) gtacagatacatctacaacaagtgatagctctgattcataaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACaa > 1:991926‑M1/100‑135 (MQ=255) acctctaccacaagtgatagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGc > 1:933603‑M1/92‑135 (MQ=255) cctctaccacaagtgatagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACACGTGATAGCa < 2:819324‑M1/45‑1 (MQ=255) ctctaccacaagtgatatcacggacacatcagcttaatgtgacagtacagatactacctctaccacaagtgacagcacggacacttcagATTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCAc > 2:2347806‑M1/90‑135 (MQ=255) atctaccacacgtgatagctaatattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCAc > 1:74902‑M1/90‑135 (MQ=255) tctaccacaagtgatagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGAt > 2:150464‑M1/89‑129 (MQ=255) tctaccacaagtgatagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACg < 2:1439523‑M1/47‑1 (MQ=255) tctaccacaagtgatagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGAACg < 1:2631536‑M1/47‑1 (MQ=255) tctaccacaagtgatagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCACAACAACAAGTGATAGCACg < 2:2508089‑M1/47‑1 (MQ=255) tctaccacaagtgatagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgaaagcacggacacgtcagCTTCAAGCGACAGTACAGATACAACCACTACCACAAGTGATAGCACg < 2:510301‑M1/47‑1 (MQ=255) accacaagtgatagctctgattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACa > 2:1245807‑M1/86‑97 (MQ=255) aagtgatagctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTAc < 2:461686‑M1/31‑1 (MQ=255) atagcagggaaccatcagattcttttgacagtacagatactacctctaccacaagtgacagcacggacacttcagCTTCAAGCGACAGTACAGATACTACCTCTCCCACAAGTGATAGCACGGATACATCAGCt > 2:431396‑M1/76‑134 (MQ=255) atagcacggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCt > 2:2737886‑M1/76‑134 (MQ=255) agctcagattcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTc > 2:720346‑M1/74‑134 (MQ=255) acggacacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAg > 2:640049‑M1/71‑77 (MQ=255) cagattaatcaacttaaagcgacattacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAg > 2:1148086‑M1/70‑133 (MQ=255) acacatcagcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCt > 1:612641‑M1/67‑68 (MQ=255) tcatcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACa > 2:384206‑M1/65‑133 (MQ=255) acatcagcttcaagtgacagtacagatactacctctaccacaagtgaaagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAg < 2:2221416‑M1/70‑1 (MQ=255) catcaacttcaagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAg > 1:1218658‑M1/64‑70 (MQ=255) agcttcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGa < 1:13608‑M1/76‑1 (MQ=255) tcaagtgacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCAc > 2:181178‑M1/56‑101 (MQ=255) tcaagcgacagtacagatactacctctaccacaagtgattgcacggatacttcagCTTCAAGCGACAGTACTGATACTACCTCTACAACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGAta > 1:801254‑M1/56‑133 (MQ=255) aagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTc < 1:695958‑M1/4‑1 (MQ=255) aagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTc > 2:695958‑M1/54‑57 (MQ=255) aagcgacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGAtactac > 1:1977778‑M1/54‑135 (MQ=255) gcgacagtacagatactacctctaccacaagtgatagcacggaaacatcagATTCAAGTGACTGTACAGATACTACCTCTACCACAAGTGACAGCACGGAAACGTCAGCTTCAAGCGACAGTACAGATACTACct > 1:2912705‑M1/52‑135 (MQ=255) gacagtacagatactacctctaccacaagtgatagcacggatacatcagCTTCAAg > 2:1654627‑M1/50‑56 (MQ=255) gacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTa < 1:2853373‑M1/15‑1 (MQ=255) gacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGa > 1:1270957‑M1/50‑125 (MQ=255) gacagtacagatactacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGAt > 1:900122‑M1/50‑126 (MQ=255) acagatactacctctaccacaagtgatagcacggatacatcagCt < 1:433510‑M1/2‑1 (MQ=255) acagatactacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACcaca < 2:1909073‑M1/92‑1 (MQ=255) ctacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGAta < 1:1436410‑M1/21‑1 (MQ=255) ctacctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAg > 1:2564668‑M1/37‑93 (MQ=255) ctacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACa > 1:557166‑M1/37‑48 (MQ=255) ctacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGAtacta > 2:2297253‑M1/37‑60 (MQ=255) ctacctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGAGACATCAGCTTCAAGCGACAGAACAGATACTACCTCTACCACAAGTgag < 2:2183175‑M1/98‑2 (MQ=255) cctctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGAt > 2:1394963‑M1/34‑53 (MQ=255) cctctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACATCTACCACAAGTGATCGCACGGACACATCAGCTTCAAGGGACAGTACAGATACTACCTCTACCACAAGTGATGGCa < 1:2434338‑M1/102‑1 (MQ=255) tctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACTGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTATACCACAAGTGAGGGCACg < 2:2846482‑M1/104‑1 (MQ=255) tctaccacaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTc < 2:311498‑M1/61‑1 (MQ=255) tctaccacaagtgatagcacggacacgtcagCTTCAAg > 1:1871841‑M1/32‑38 (MQ=255) tctaccacaagtgatagcacggacacgtcagCTTCAAg > 2:2133421‑M1/32‑38 (MQ=255) tctaccacaagtgatagcacggacacgtcagCTTCAAg < 2:1871841‑M1/7‑1 (MQ=255) tctaccacaagtgacagcacggacacttcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTc > 1:2330373‑M1/32‑92 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAg < 1:2133421‑M1/7‑1 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAg < 1:1831270‑M1/7‑1 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGAt > 1:1634051‑M1/32‑51 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTAc > 1:1906110‑M1/32‑62 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGAt > 2:2482087‑M1/32‑72 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAg > 2:1773151‑M1/32‑95 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAg < 1:1773151‑M1/64‑1 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTa > 1:1398037‑M1/32‑118 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGATGGCACg < 1:1195989‑M1/104‑1 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGATGGCACg < 1:284050‑M1/104‑1 (MQ=255) tctaccacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACAACAAGTGATAGCACGGACACATCAGCATCAAGTGACAGTACAGATACGAACTCTACAACAAATGAATGCACg < 2:608650‑M1/104‑1 (MQ=255) tctaccaaaagtgatagcacggatacatcagCTTCAAGCGACAGTACAg > 1:2757697‑M1/32‑49 (MQ=255) cacaagtgatagcacggatacatcagCTTCAATCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGACAGCACGGacac < 1:1003011‑M1/109‑1 (MQ=255) cacaagtgatagcacggatacatcagCTTCAAGCGACa > 1:2712613‑M1/27‑38 (MQ=255) cacaagtgacagcacggacacgtcagCTTCAAGCGACa > 1:1032484‑M1/27‑38 (MQ=255) cacaagtgacagcacggacacgtcagCTTCAAGCGACa < 2:1032484‑M1/12‑1 (MQ=255) cacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGAtact > 2:1198030‑M1/27‑49 (MQ=255) cacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGt > 1:2676642‑M1/27‑97 (MQ=255) cacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGt < 2:2676642‑M1/71‑1 (MQ=255) cacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGATAGCAcggaaac < 2:883544‑M1/109‑4 (MQ=255) cacaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGAGACAGTACAGATACTACCTCTACAACAAGTGATAGCAAGGacac < 2:776928‑M1/109‑1 (MQ=255) acaagtgatagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGACAGCACGGacac < 2:204848‑M1/109‑1 (MQ=255) acaagtgacagcacggacacgtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACaa > 2:238554‑M1/26‑61 (MQ=255) caagtgatagcacggatacatcagCTTCAAGCGACAGTACAGAt < 1:2506179‑M1/20‑1 (MQ=255) gacagcacggacacgtcagCTTCAAGCGACAGTACAGATACAACCTCTACCACAAGTGATAGc < 1:511562‑M1/44‑1 (MQ=255) atagcacggatacatcagCTTCAAGCGACAGTACAGa < 1:2481108‑M1/19‑1 (MQ=255) atagcacggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTc < 1:2190259‑M1/61‑1 (MQ=255) acggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGACAGCACGGACACGTCAGCTTCAAGc < 1:1114236‑M1/122‑1 (MQ=255) cggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGACAGCACGGACACGTCAGCTTCAAg > 1:355573‑M1/13‑133 (MQ=255) ggatacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGACAGCACGGACACGTCAGCTTCAAGCGa < 2:2628523‑M1/124‑1 (MQ=255) tacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACACGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGACAGCACGGACACGTCAGCTTCACGCGACa > 1:2030931‑M1/9‑134 (MQ=255) tacatcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGACAGCACGGACACGTCAGCTTCAAGCGACa > 1:225146‑M1/9‑134 (MQ=255) catcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACcaca < 1:1494932‑M1/92‑1 (MQ=255) gtcagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGATGGCACGGACACGTCAGCTTCAAGCGACAGTAc > 2:2590320‑M1/6‑135 (MQ=255) acagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGTACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGATGGCACGGACACGTCAGCTTCAAGCGACAGTACg > 1:1514753‑M1/5‑135 (MQ=255) cagCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCAc > 1:650603‑M1/4‑49 (MQ=255) agCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACa > 2:1954725‑M1/3‑71 (MQ=255) gCTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTAc < 2:2090198‑M1/88‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCAAGCGACAGTACAGATACTACCTCTACCACAAGTGATAGCACGGACACATCAGCTTCAAGTGACAGTACAGATACTACCTCTACCACAAGTGATGGCACGGACACGTCAGCTTCAAGCGACAGTACGGA > AssemblyC74_contig_24/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |