New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_44 = 810795 (0.910)229 (0.470)
+GCACTCTTGTCACCATCAAT
52/216 0.0 40.6% coding (327/1134 nt) rasttk_feature_annotation_tool=annotate_proteins_km er_v2 hypothetical protein
?AssemblyC74_contig_60 = 439 0 (0.000)coding (438/438 nt) rasttk_feature_annotation_tool=annotate_proteins_si milarity FIG00630508: hypothetical protein

Only 100 of 273 total aligned reads displayed.

GATACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_60/305‑439
                                                                                                                                      |                                                                                                                            
gATACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTa                                                                                                                              >  2:1155726/1‑135 (MQ=255)
  tACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  1:1155726‑M2/1‑133 (MQ=255)
  tACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  2:2771402‑M2/1‑133 (MQ=255)
  tACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  1:603886‑M2/1‑133 (MQ=255)
   aagtcGAATGTTATTTTTATGAGTGGTATGTTCCAATGTTGTGGATCTTTAACAACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGTGTGACATATTTGATGGTGTAAAAATTTGTGTAatt                                                                                                                           >  2:2723335‑M2/3‑132 (MQ=255)
   aCGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAatt                                                                                                                           >  1:2598533‑M2/1‑132 (MQ=255)
   aCGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAatt                                                                                                                           >  1:2780062‑M2/1‑132 (MQ=255)
   aCGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAatt                                                                                                                           >  2:108416‑M2/1‑132 (MQ=255)
       cGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAATTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGAGTAattgatg                                                                                                                       <  1:2558046‑M2/135‑8 (MQ=255)
        gAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatgg                                                                                                                      >  2:675913‑M2/1‑127 (MQ=255)
         aaTGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGTTGGTGTAAAAAATTGTGTAattgatggt                                                                                                                     >  1:1875181‑M2/1‑126 (MQ=255)
            gttatgttTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgac                                                                                                                  <  1:2246126‑M2/135‑13 (MQ=255)
                   ttATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtg                                                                                                           <  1:1565832‑M2/135‑20 (MQ=255)
                        aGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatt                                                                                                       <  1:1299829‑M2/134‑24 (MQ=255)
                               tGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtt                                                                                               <  2:1214009‑M2/135‑32 (MQ=255)
                               tGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtt                                                                                               <  2:1827119‑M2/135‑32 (MQ=255)
                               tGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtt                                                                                               <  1:1717039‑M2/135‑32 (MQ=255)
                               tGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtt                                                                                               <  2:438150‑M2/135‑32 (MQ=255)
                               tGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtt                                                                                               <  1:2078145‑M2/135‑32 (MQ=255)
                                    cgtgtctgtggctcttTAACCACTTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttct                                                                                          >  1:710368‑M2/7‑99 (MQ=255)
                                      aGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  1:869882‑M2/1‑97 (MQ=255)
                                      aGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  2:320323‑M2/1‑97 (MQ=255)
                                      aGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  2:966457‑M2/1‑97 (MQ=255)
                                       ggTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgat                                                                                       <  1:1673969‑M2/135‑40 (MQ=255)
                                       ggTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAAGTGTTTAattgatggtgacaagagtgcatttactcgtttttctgat                                                                                       <  2:1459118‑M2/135‑40 (MQ=255)
                                          tgtgGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatc                                                                                    <  2:1598063‑M2/135‑43 (MQ=255)
                                              gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  1:2066995‑M2/135‑47 (MQ=255)
                                              gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  1:2678662‑M2/135‑47 (MQ=255)
                                              gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  2:1719066‑M2/135‑47 (MQ=255)
                                              gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  1:385423‑M2/135‑47 (MQ=255)
                                                 ctTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttag                                                                             >  2:849396‑M2/1‑86 (MQ=255)
                                                 ctTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaattta                                                                              >  2:531173‑M2/1‑86 (MQ=255)
                                                  tttAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttaga                                                                            >  2:1926075‑M2/1‑85 (MQ=255)
                                                     aaCCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgc                                                                         <  1:2335962‑M2/135‑54 (MQ=255)
                                                     aaCCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgc                                                                         <  2:1373625‑M2/135‑54 (MQ=255)
                                                     aaCCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgc                                                                         <  2:1974213‑M2/135‑54 (MQ=255)
                                                      aCCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgc                                                                         <  2:912213‑M2/134‑54 (MQ=255)
                                                           aTTAGATGTAAGTAATTGTGATACGTCGAAGGTTTTTCTTATGGGTGACATTTTTGATGTTGTAAAAATTTGTGTTattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  1:2859302‑M2/1‑76 (MQ=255)
                                                           aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  1:2921964‑M2/1‑76 (MQ=255)
                                                           aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  1:1756417‑M2/1‑76 (MQ=255)
                                                           aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  2:1565830‑M2/1‑76 (MQ=255)
                                                           aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  2:1143636‑M2/1‑76 (MQ=255)
                                                           aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  1:1647448‑M2/1‑76 (MQ=255)
                                                            ttAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaat                                                                  >  2:2478033‑M2/1‑75 (MQ=255)
                                                            ttAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaat                                                                  >  1:1225712‑M2/1‑75 (MQ=255)
                                                               gATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaat                                                                  <  2:1314735‑M2/132‑61 (MQ=255)
                                                                  gtaagtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatct                                                              >  2:2131836‑M2/1‑69 (MQ=255)
                                                                     agtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggtta                                                         <  1:921568‑M2/135‑70 (MQ=255)
                                                                      gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  2:252441‑M2/1‑65 (MQ=255)
                                                                      gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  2:512500‑M2/1‑65 (MQ=255)
                                                                      gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  1:2818005‑M2/1‑65 (MQ=255)
                                                                        aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  2:389504‑M2/135‑73 (MQ=255)
                                                                        aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  2:303598‑M2/135‑73 (MQ=255)
                                                                        aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  2:23991‑M2/135‑73 (MQ=255)
                                                                        aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  1:1015163‑M2/135‑73 (MQ=255)
                                                                        aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  2:2630786‑M2/135‑73 (MQ=255)
                                                                        aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   <  2:749701‑M2/122‑60 (MQ=255)
                                                                         cttgGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      >  2:2163181‑M2/2‑62 (MQ=255)
                                                                         aTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      >  1:801306‑M2/1‑62 (MQ=255)
                                                                         aTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      >  2:2678662‑M2/1‑62 (MQ=255)
                                                                          ttGGTATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGTTGGTGTAAAAAATTGTGTTattgttgttgacaagagtgcatttactcgtttttcttatatcaatttagatgcatcaaatatctggttttaaga                                                    >  1:1312971‑M2/1‑61 (MQ=255)
                                                                               aTACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtc                                                >  1:2501439‑M2/1‑56 (MQ=255)
                                                                                 aCGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgta                                             >  2:1659593‑M2/1‑54 (MQ=255)
                                                                                 aCGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgt                                              >  1:1167178‑M2/1‑54 (MQ=255)
                                                                                  cGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaa                                            >  2:2803267‑M2/1‑53 (MQ=255)
                                                                                  cGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgta                                             <  1:537013‑M2/134‑82 (MQ=255)
                                                                                    tCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaa                                           <  1:1144603‑M2/134‑84 (MQ=255)
                                                                                    tCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaa                                           <  2:2336588‑M2/134‑84 (MQ=255)
                                                                                          gTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttt                                                                                             >  2:2878387‑M2/1‑45 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:2825535‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:1946015‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:2876837‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:2496804‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:2723362‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:464459‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:758373‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:2089232‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:2066995‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:813958‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:1758376‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:2406709‑M2/1‑42 (MQ=255)
                                                                                             tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:1299850‑M2/1‑42 (MQ=255)
                                                                                              ttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaata                                >  1:1373625‑M2/1‑41 (MQ=255)
                                                                                                cTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacg                              <  1:2895649‑M2/135‑97 (MQ=255)
                                                                                                cTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacg                              <  2:1947431‑M2/135‑97 (MQ=255)
                                                                                                cTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacg                              <  2:784734‑M2/135‑97 (MQ=255)
                                                                                                          aCATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaag                    >  1:1540218‑M2/1‑29 (MQ=255)
                                                                                                          aCATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaa                     >  1:1993083‑M2/1‑29 (MQ=255)
                                                                                                                   aTGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagttgtcgtaaacacagtgaatacgttgtttaaagatgatgcgc           <  1:243919‑M2/135‑116 (MQ=255)
                                                                                                                   aTGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgc           >  2:1267894‑M2/1‑20 (MQ=255)
                                                                                                                   aTGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgc           >  1:953987‑M2/1‑20 (MQ=255)
                                                                                                                   aTGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgc           <  2:1716482‑M2/135‑116 (MQ=255)
                                                                                                                    tGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgca          <  1:2831118‑M2/135‑117 (MQ=255)
                                                                                                                        gtAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcatacc      <  1:1118723‑M2/135‑121 (MQ=255)
                                                                                                                         tAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcatacc      >  1:2148467‑M2/1‑14 (MQ=255)
                                                                                                                          aaaaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcataccgt    <  1:1443695‑M2/135‑123 (MQ=255)
                                                                                                                          aaaaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 <  2:801645‑M2/106‑94 (MQ=255)
                                                                                                                           aaaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcataccgtt   >  2:599411‑M2/1‑12 (MQ=255)
                                                                                                                            aaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatactttgtttaaagatgatgctcataccgttt  <  1:1032938‑M2/135‑125 (MQ=255)
                                                                                                                            aaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcataccgttt  <  1:831508‑M2/135‑125 (MQ=255)
                                                                                                                                      |                                                                                                                            
GATACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_60/305‑439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.