| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_49 | = 764 | 0 (0.000) | 188 (0.390) | 69/248 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– |
| ? | AssemblyC74_contig_59 | 1 = | 0 (0.000) | intergenic (–/‑31) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Transposase, IS4 | |||||
Only 100 of 188 total aligned reads displayed.
AATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/636‑764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > AssemblyC74_contig_59/1‑133 AATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTAC < 2:6440/135‑1 CACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTAT > 1:1032242/1‑135 GAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATC > 1:3812870/1‑135 CCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTT < 2:3873268/135‑1 CCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGT > 2:275113/1‑134 CAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 2:172250/135‑1 GGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCC > 2:533567/1‑134 GTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCG < 2:335802/132‑1 TCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCAC < 2:3503155/135‑1 CATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGT > 2:3831458/1‑135 CATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGT > 2:3705900/1‑135 CATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGT > 2:1521560/1‑135 GACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAA < 1:3569793/135‑1 GACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAA < 2:3638216/135‑1 GACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAA > 1:1933816/1‑135 GTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAAC > 2:3263338/1‑135 GAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACAT > 1:1852202/1‑135 AAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATG > 1:757608/1‑135 AAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC > 2:2526530/1‑117 AAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTC < 1:2526530/117‑1 AGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGA < 2:1910910/135‑1 TAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAAT > 2:2989082/1‑135 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC < 1:2807207/135‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAAT < 1:2224308/134‑1 AGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAAT < 1:275113/134‑1 GAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTCGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCA > 1:2109916/1‑135 GAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCA > 2:1373234/1‑135 GACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGA > 2:3084080/1‑135 ACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 2:1032242/133‑1 ACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAG < 1:1039753/133‑1 TTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAA < 2:1455606/134‑1 TTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAA < 2:1933816/134‑1 TTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATCACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAA < 2:887720/135‑1 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:625200/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 2:683694/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 2:1310245/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACT > 1:3882590/1‑135 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAA < 2:302326/130‑1 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAA > 1:302326/1‑130 ATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATACATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGACACGTAATAACATGGATATATCAGAAAAACT > 2:3752371/1‑135 TCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA < 2:2961447/135‑1 TCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA < 2:1758282/135‑1 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:3142141/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:2185109/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:1766842/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 2:3416987/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 2:527563/1‑134 CGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTA > 1:2995346/1‑134 GAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGAC < 1:3850001/135‑1 AAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAA > 2:2111748/1‑122 GCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGC > 2:2404203/1‑135 CCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGA < 1:3705900/135‑1 CCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGA < 1:1362444/135‑1 CAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAA < 2:33222/135‑1 CCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAG > 1:3292575/1‑135 CCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAG < 2:621595/135‑1 AGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAA > 2:1607364/1‑135 GGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAA > 1:499907/1‑135 GGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAA > 1:1295049/1‑135 GGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAAC > 2:97461/1‑135 GGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAAC > 2:1600611/1‑135 ACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAG > 1:264849/1‑135 AAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTT > 1:3627268/1‑135 AAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTT > 2:92648/1‑135 AAGTATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGTGCATTACTATATCCGTTCAGCCACGTAAAAACAGTGATAAATCAGAAAAACTAGACCACAGCTTAATTGGAAAACAAAGAAAAACAGTTG < 1:3752371/135‑1 AAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTG < 1:3373821/135‑1 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:2876886/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:2089102/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:556567/1‑135 AGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:1068048/1‑135 GGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAGCATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 2:3552109/1‑134 GGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGA > 1:2580060/1‑134 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:1670042/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:19812/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:881870/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:2779500/1‑135 TTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTT > 1:2307283/1‑135 GCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTT > 2:1512757/1‑133 ATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1267111/1‑134 ATAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT < 1:1607364/134‑1 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCTACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:400688/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1507937/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:595404/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1312714/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:1589882/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 2:1892968/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:1961697/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:3166527/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCT > 1:983470/1‑133 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGA < 1:1483007/109‑1 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGA > 2:1483007/1‑109 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGA > 1:2483583/1‑100 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGA < 2:2483583/100‑1 TAAAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATC > 1:3348584/1‑72 AAATCCATGAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCT < 1:2725238/135‑1 GAAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAA > 1:2957120/1‑135 AAAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAAT > 1:2975464/1‑135 AAAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATT > 2:2767866/1‑135 AAGCTTGCCCTTAAGGGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATT < 2:3922472/134‑1 GGCATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAACATTAGGTTGTCAAAATTTC > 2:2677708/1‑135 AATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/636‑764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACTATATCCGTTCCGCCACGTAAAAACATGGATAAATCAGAAAAACTAGACCACAGCTTACTTGGAAAACAAAGAAAAACAGTTGAGACTGTTTTTTCTTCCTTAGAAAAATTAGGTTGTCAAAATTTC > AssemblyC74_contig_59/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |