| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_49 | = 764 | 0 (0.000) | 188 (0.390) | 69/248 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– |
| ? | AssemblyC74_contig_59 | 1 = | 0 (0.000) | intergenic (–/‑31) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Transposase, IS4 | |||||
Only 100 of 500 total aligned reads displayed.
TTACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/630‑764 | ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg > 2:1545821/1‑135 (MQ=255)ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg > 1:2924125/1‑135 (MQ=255)ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg > 1:2767774/1‑135 (MQ=255)ttactCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg < 1:2741769/135‑1 (MQ=255) cACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAACAGCTTGCCCTTAAGGGggttctgtt > 1:1007919‑M2/1‑126 (MQ=255) cACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgtt > 1:1602407‑M2/1‑126 (MQ=255) ccAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgt > 1:736349‑M1/1‑119 (MQ=255) ccAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgt > 2:275113‑M1/1‑119 (MQ=255) gtCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccg < 2:335802‑M1/132‑20 (MQ=255) aTGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaa < 2:1592927‑M2/135‑27 (MQ=255) aTGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgta > 1:3001222‑M1/1‑109 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAggg > 2:1813282/1‑107 (MQ=255) gACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaa < 2:3638216‑M1/135‑29 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGGCAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat > 2:3874720‑M2/1‑104 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaata < 2:2929720‑M2/135‑32 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat > 1:1825590‑M2/1‑104 (MQ=255) gTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat > 2:3559839‑M2/1‑104 (MQ=255) gAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggtgctgttgcaaagttttaaataaagaataaa < 1:2198966‑M2/135‑34 (MQ=255) aGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaat < 1:3324411‑M2/134‑36 (MQ=255) aGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgtt > 2:3935506‑M2/1‑99 (MQ=255) aGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatgga < 2:1910910‑M1/135‑37 (MQ=255) aGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatgga > 2:2395988‑M1/1‑99 (MQ=255) ttAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATCTCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataacgaataaaatccctt > 1:131635‑M2/1‑95 (MQ=255) ttAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGtgttctgttgcaaagttttaaataaagaataaaatccc > 2:44344‑M2/1‑95 (MQ=255) ttAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccctt > 2:3055848‑M2/1‑95 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttac > 2:3701378‑M2/1‑93 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatc < 1:2807207‑M1/135‑43 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatc < 2:935867‑M1/135‑43 (MQ=255) agagACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatc < 2:3001222‑M1/135‑43 (MQ=255) gagaCTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacg < 1:1731565‑M2/135‑44 (MQ=255) gagaCTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacg < 1:3759530‑M2/135‑44 (MQ=255) gagaCTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacg < 2:3849128‑M2/135‑44 (MQ=255) gagaCTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacg < 1:2140944‑M2/135‑44 (MQ=255) tttATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggta > 2:2140944‑M2/1‑87 (MQ=255) tttATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGACCTTAAGGGggttatgttgcaaagttttaaataaagaataaaatcccttacggta > 1:2287160‑M2/1‑87 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagtataaaatcccttacggtatctat < 2:1266490‑M2/135‑52 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccctt < 1:3267388‑M2/124‑41 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaact > 2:3473140‑M1/1‑84 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaact > 2:1310245‑M1/1‑84 (MQ=255) aTCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATACATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgacacgtaataacatggatatatcagaaaaact > 2:3752371‑M1/1‑84 (MQ=255) tCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaacta < 2:1758282‑M1/135‑53 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 2:1371870‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 1:484474‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaat < 1:1879480‑M2/112‑31 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggctctgttgcaaagttttaaataaagaataaaatcccttacggtatctatga < 1:2638725‑M2/135‑54 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaacta > 2:1625426‑M1/1‑82 (MQ=255) cGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaacta > 1:3142141‑M1/1‑82 (MQ=255) aagCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaa > 2:2111748‑M1/1‑76 (MQ=255) gCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagc > 2:654244‑M1/1‑74 (MQ=255) tCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcc < 2:1054595‑M2/135‑70 (MQ=255) aaTATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaat < 1:1983245‑M2/135‑74 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTTCACTTAAGGGgtttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 1:1375847‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 1:1543854‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:3126895‑M2/1‑57 (MQ=255) ccTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 1:3512710‑M2/1‑57 (MQ=255) aGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatacctt < 1:1678499‑M2/135‑82 (MQ=255) gggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattccca > 1:2535213‑M2/1‑52 (MQ=255) gggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattccca < 2:2535358‑M2/123‑72 (MQ=255) gggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaa > 1:1295049‑M1/1‑52 (MQ=255) ggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 1:1956885‑M2/1‑51 (MQ=255) ggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac < 2:1956885‑M2/129‑79 (MQ=255) ggACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaa < 1:976037‑M1/98‑48 (MQ=255) aCAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac > 2:2271713‑M2/1‑49 (MQ=255) aaGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttg < 1:3373821‑M1/135‑90 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcag < 2:267635‑M2/134‑90 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcag < 1:147440‑M2/134‑90 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcag < 1:833562‑M2/134‑90 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttga > 1:556567‑M1/1‑45 (MQ=255) aGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttc > 2:516772‑M1/1‑45 (MQ=255) ggATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttga > 1:3834743‑M1/1‑44 (MQ=255) ggATATATTAGCCATAAAAACCATGAAAAGCTTGCCCTTCAGGGggttctggtgcaatgttttaaagaaataataaaatcccttccggtatcgctgatttaagctgggattcccaataataccttgatttcagta < 1:3690729‑M2/135‑92 (MQ=255) gATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggat < 1:3884591‑M2/109‑67 (MQ=255) gATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaat < 2:889265‑M2/66‑24 (MQ=255) atatatTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtaca < 2:1879333‑M2/135‑94 (MQ=255) atTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagacc < 2:2051379‑M2/135‑98 (MQ=255) ttAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttt > 2:758800‑M1/1‑37 (MQ=255) aTAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaac > 2:1678499‑M2/1‑31 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaaccc < 2:1449717‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaaccc < 2:3796237‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaaccc < 2:3299669‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatatatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaaccc < 1:2323565‑M2/135‑106 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatccc > 2:3272121‑M2/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgctacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:400688‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 2:595404‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttct > 1:3611940‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaaga > 2:1483007‑M1/1‑30 (MQ=255) tAAAATCCATGAAAAGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttgga < 2:2483583‑M1/100‑71 (MQ=255) aTCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaag < 2:3218405‑M2/135‑110 (MQ=255) aTCCATGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttga < 1:120579‑M2/109‑84 (MQ=255) tGAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagt > 1:1767570‑M2/1‑21 (MQ=255) gAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagt < 1:775671‑M2/134‑115 (MQ=255) gAAAAGCTTGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaa < 1:1043343‑M2/120‑101 (MQ=255) aaaaGCTTGCCCTTAAGGGcattactatatccgttccgccacgtaaaaacatggataaatcagaaaaactagaccacagcttacttggaaaacaaagaaaaacagttgagactgttttttcttccttagaaaaat > 1:2975464‑M1/1‑19 (MQ=255) tGCCCTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataaaaccttgatttcagtacagaccgaaaacccgaagagagtgccttctt < 1:1134263‑M2/134‑123 (MQ=255) ccTTAAGGGggttctgttgcaaagttttaaataaagaataaaatc < 1:2083577‑M2/45‑37 (MQ=255) cTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgg > 2:1180823‑M2/1‑8 (MQ=255) cTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgg < 1:2454635‑M2/135‑128 (MQ=255) cTTAAGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataatac < 1:3042880‑M2/86‑79 (MQ=255) aaGGGggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagtacagaccgaaaacccgaagagagtgccttcttttcgggtt > 1:668977‑M2/1‑5 (MQ=255) gggggttctgttgcaaagttttaaataaagaataaaatcccttacggtatctatgatttaagctgggattcccaataataccttgatttcagt > 2:284999‑M2/1‑3 (MQ=255) | TTACTCAATCACGAATCCAGGTGTCCATGACGTGAAAGTGTTAGAGACTTTATCGGAAGAAGCGAATCTTCCCAATATCCTAGGGGACAAAGGATATATTAGCCATAAAATCCATGAAAAGCTTGCCCTTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_49/630‑764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |