| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_15 | 32682 = | 1425 (2.420) | 471 (0.870) | 96/246 | 0.4 | 36.4% | coding (1059/1284 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein |
| ? | AssemblyC74_contig_30 | 32 = | 235 (0.480) | coding (32/252 nt) | rasttk_feature_annotation_tool=annotate_proteins_si milarity | Mobile element protein | |||||
Only 100 of 1983 total aligned reads displayed.
TGATATGTGTGTGAAGATTCTCTAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTCACTTTCTGTTAAATA > AssemblyC74_contig_15/32549‑32816 | gttttgatatgcgtgtgaagattctctaattttgcgttagaatactttttcgaaaatgctagctgaattcctttttcatatctgaaaaaagcttttttgatgtagtgaagttccgagggaacttctttgggcat < 1:563986‑M1/1‑1 (MQ=255) atatGTGTGTGAAGATTCTCTAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTATTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACATATTTGGGCAAAtctcta > 2:621453/1‑133 (MQ=11) tgtgtgtgAAGATTCTCTAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGt < 1:2538191/135‑1 (MQ=32) gtgAAGATTCTCTAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTg > 2:3360413/1‑135 (MQ=32) gcgtgtgaagattctctaattttgcgttagaatactttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTg > 2:2256169‑M1/124‑135 (MQ=255) gAAGATTCTCTAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGa > 1:2871112/1‑135 (MQ=32) gtgaagattctctaattttgcgttagaatactttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggctttattgatgtagtgaagatccgagggaacttctttgggcaTCGAAGTAGCTGGaaa < 2:557787‑M1/16‑1 (MQ=255) gATTCTCTAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGaaaa > 1:2229926/1‑135 (MQ=32) tctAATTTTGCGTTAGAATACATTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGt > 2:2839182/1‑134 (MQ=17) tAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGATTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGAAGCTGGAAAAAAGt > 1:646118/1‑132 (MQ=17) gTTAGAATACTTTTTCGAAAATGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGt > 1:891430/1‑133 (MQ=14) ttAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGttt < 2:740886/134‑1 (MQ=38) tgaGAATACTTTTTCGAAAATGCTAGCTGAAGTCCTTTTTCATATCTGAAAAAAGCTTTTTGGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGttt < 2:1786227/132‑1 (MQ=11) tAGAATACTTTTTCGAAAATGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTtct > 2:3661879/1‑135 (MQ=21) tAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGAGGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTtct > 2:2017768/1‑135 (MQ=255) ttagaatactttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGt > 2:2345878‑M1/98‑135 (MQ=255) ttagaatactttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGt > 1:160489‑M1/98‑135 (MQ=255) tagaatactttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGt > 1:1821342‑M1/97‑103 (MQ=255) aTACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTg > 1:3389146/1‑135 (MQ=255) taatttttCGAAAATGCTAGATGAATTCCTTTTTCTTATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTAGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGt < 1:2471166/130‑1 (MQ=11) tACTTTTTCGAAAATGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGt < 2:2447272/133‑1 (MQ=18) tACTTTTTCGAAAATGCGAGCTGAATTCCTTTGTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGt < 2:1252510/133‑1 (MQ=255) tACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGt < 1:837032/133‑1 (MQ=255) tACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGt < 1:1228659/133‑1 (MQ=255) tACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGCGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGt < 2:481984/133‑1 (MQ=255) gaatactttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGAt < 1:3535075‑M1/41‑1 (MQ=255) tttttCGAAAATGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATaa < 2:1651905/135‑1 (MQ=255) ttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCt > 2:88338‑M1/88‑135 (MQ=255) ttttcgaaaatgctagctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCt > 1:1411606‑M1/88‑135 (MQ=255) cGAAAATGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCt > 2:3458564/1‑135 (MQ=255) cGAAAATGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCt < 2:37130/135‑1 (MQ=255) gAAAATGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTa < 2:1381616/135‑1 (MQ=255) aaaaTGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGttt > 1:216580/1‑118 (MQ=16) aaaaTGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTa > 2:2195638/1‑134 (MQ=255) aaaaTGCTAGCTGAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTa > 2:359734/1‑134 (MQ=255) aaaaCGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTGCTTTGGGCATTTCTCGAAGTAGCTGGAAATAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTa > 2:1587297/1‑134 (MQ=255) atgCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAagca < 2:1452063/133‑1 (MQ=255) aCGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAagca < 2:259002/135‑1 (MQ=255) tgCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAagcag < 1:1140675/134‑1 (MQ=255) gAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGa < 2:3542783/134‑1 (MQ=255) gAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGa < 1:1373353/134‑1 (MQ=255) gAATTCCTTTTTCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGa < 1:359734/134‑1 (MQ=255) agctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGa > 1:2799824‑M1/74‑134 (MQ=255) agctgaattcctttttcatatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGa > 2:2410147‑M1/74‑134 (MQ=255) ttCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATa > 2:1720970/1‑135 (MQ=255) tCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCt < 2:2777664/110‑1 (MQ=255) tCATATCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCt < 1:1962508/110‑1 (MQ=255) cATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGt < 1:1478804/99‑1 (MQ=255) tCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGt < 2:3137759/95‑1 (MQ=255) tCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGt > 1:3137772/1‑95 (MQ=255) tCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGt < 2:827053/135‑1 (MQ=255) tCTGAAAAAAGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGt < 1:394638/135‑1 (MQ=255) catatctgaaaaaggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGt > 2:1000924‑M1/58‑135 (MQ=255) aaGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAg > 1:2991315/1‑134 (MQ=255) ttttttGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCa < 1:1527564/133‑1 (MQ=255) ttttttGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCa < 2:1932324/133‑1 (MQ=255) ggcttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCaaaa < 1:3329913‑M1/91‑1 (MQ=255) ttttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAagag < 1:166543‑M1/94‑1 (MQ=255) ttttgatgtagtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGAt > 1:2936017‑M1/40‑135 (MQ=255) gATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGAt < 1:687718/135‑1 (MQ=255) gATGTAGTGAAGGTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGAGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGAt < 2:3224498/135‑1 (MQ=255) gTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGaaa < 2:2512058/134‑1 (MQ=255) agtgaagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTa < 1:321660‑M1/104‑1 (MQ=255) aaGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTa > 2:2709358/1‑134 (MQ=255) aagttccgagggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACg > 1:3479305‑M1/27‑134 (MQ=255) ccGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGt < 1:3074218/135‑1 (MQ=255) ccGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACg < 1:1866354/133‑1 (MQ=255) cGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTc > 1:1000610/1‑135 (MQ=255) cGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGa > 2:3295598/1‑85 (MQ=255) cGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAg < 1:3889065/129‑1 (MQ=255) aGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGt < 1:1755280/60‑1 (MQ=255) aGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGt > 1:74104/1‑125 (MQ=255) aGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTc > 2:3062862/1‑133 (MQ=255) aGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTc > 1:2286345/1‑133 (MQ=255) aGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTc > 1:2413810/1‑133 (MQ=255) gAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAATCGCTa > 1:3763030/1‑68 (MQ=255) gAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAac > 2:666284/1‑133 (MQ=255) gAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAagca > 1:2660022/1‑72 (MQ=255) gAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAac > 1:3831669/1‑133 (MQ=255) gAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAac > 2:1503212/1‑133 (MQ=255) gAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTGTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAac > 1:3661798/1‑133 (MQ=255) gAACTGCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCGCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCCAAAGAGATTGAAAGTAGACGGGCAac > 2:1146169/1‑133 (MQ=255) agggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGt > 1:1075254‑M1/19‑128 (MQ=255) agggaacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAactac < 2:1843451‑M1/117‑1 (MQ=255) ttcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTc < 1:2049830/135‑1 (MQ=255) ttcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTc < 1:3276146/135‑1 (MQ=255) ttcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATACGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCATAAGAGATTGAAAGTAGACGGTCAACTACTTc < 2:1072790/135‑1 (MQ=255) ttcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTc < 2:3905538/135‑1 (MQ=255) tcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGAt > 2:2920754/1‑55 (MQ=255) tcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCttt < 2:3789889/72‑1 (MQ=255) tcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGt < 2:21198/117‑1 (MQ=255) tcttTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACtt > 2:2983910/1‑133 (MQ=255) aacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTc > 2:2633138‑M1/15‑134 (MQ=255) aacttctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTc > 1:492679‑M1/15‑134 (MQ=255) tctttgggcaTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTCACttt > 1:2364737‑M1/11‑135 (MQ=255) tGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTCACttt < 1:2593400/135‑1 (MQ=255) gCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGt < 2:1317793/110‑1 (MQ=255) gCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGGTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGt > 1:1317793/1‑110 (MQ=255) aTTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTCACTTTCTGtt > 2:3861386/1‑135 (MQ=255) TCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTCACTTTCTGTTAAAt < 1:2743705‑M1/134‑1 (MQ=255) | TGATATGTGTGTGAAGATTCTCTAATTTTGCGTTAGAATACTTTTTCGAAAACGCTAGCTGAATTCCTTTTTCATATCTGAAAAAGGCTTTTTTGATGTAGTGAAGTTCCGAGGGAACTTCTTTGGGCATTTCTCGAAGTAGCTGGAAAAAAGTAGCTGCTTGTTTCTCGTGATAAGCGCTAAGCAGCTTTTGATCATACTGATAAGCCGTTTTAAGTTCAAAAGAGATTGAAAGTAGACGGTCAACTACTTCACTTTCTGTTAAATA > AssemblyC74_contig_15/32549‑32816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |