| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_15 | 32682 = | 1425 (2.420) | 471 (0.870) | 96/246 | 0.4 | 36.4% | coding (1059/1284 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein |
| ? | AssemblyC74_contig_30 | 32 = | 235 (0.480) | coding (32/252 nt) | rasttk_feature_annotation_tool=annotate_proteins_si milarity | Mobile element protein | |||||
Only 100 of 714 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTCACACACATATCAAAACGT > AssemblyC74_contig_30/1‑166 | tttaacagaaagtgaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgat < 2:139311‑M2/1‑1 (MQ=255) aaagtgaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAaaga > 2:69007‑M2/126‑135 (MQ=255) aaagtgaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAaaga > 1:2364737‑M2/126‑135 (MQ=255) agtgaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAaaga < 2:385202‑M2/10‑1 (MQ=255) gaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGtt > 1:3563980‑M2/121‑134 (MQ=255) gaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGtt > 1:2928375‑M2/121‑134 (MQ=255) gaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGtt > 1:2718054‑M2/121‑134 (MQ=255) gaagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGtt > 1:2218778‑M2/121‑134 (MQ=255) aagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTc < 2:1331557‑M2/15‑1 (MQ=255) aagtagttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTc < 2:2080869‑M2/15‑1 (MQ=255) agttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCg > 2:1783432‑M2/116‑135 (MQ=255) gttgaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCg < 2:188905‑M2/20‑1 (MQ=255) gaccgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCg > 2:382832‑M2/112‑131 (MQ=255) accgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTc > 2:932226‑M2/111‑125 (MQ=255) accgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCg < 1:3251278‑M2/20‑1 (MQ=255) accgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAAc > 2:2545409‑M2/111‑134 (MQ=255) accgtctactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAAc > 1:1011986‑M2/111‑134 (MQ=255) accgtatactttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACt < 1:2534075‑M2/25‑1 (MQ=255) actttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTAc > 1:2290606‑M2/104‑135 (MQ=255) tttcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgataaacaagcagctacttttttccagctacttcgaTTCCCAAAGAAGTTCCCTCGGACATTCACTACAt > 1:529986‑M2/102‑135 (MQ=255) tcaatctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCa < 2:109406‑M2/36‑1 (MQ=255) tctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCaaaaa > 1:839709‑M2/96‑135 (MQ=255) ctcttttgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCaaaaaa < 1:2639560‑M2/41‑1 (MQ=255) tgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCttt > 1:3198052‑M2/89‑135 (MQ=255) tgaacttaaaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCttt > 2:275935‑M2/89‑135 (MQ=255) aaacggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGata < 1:3030751‑M2/55‑1 (MQ=255) acggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAATGCCTTTTTCAGATATg > 2:3335593‑M2/79‑135 (MQ=255) acggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATg > 2:2342859‑M2/79‑135 (MQ=255) acggcttatcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCATTTTCAGATATg < 2:3709197‑M2/57‑1 (MQ=255) gctaatcagtatgatcaaaagctgctttgcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGaaa < 2:3557993‑M2/60‑1 (MQ=255) atcagtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAgg > 1:2850732‑M2/72‑135 (MQ=255) agtatgatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGaa > 2:2851247‑M2/69‑134 (MQ=255) gatcaaaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGc > 1:1153162‑M2/64‑135 (MQ=255) aaagctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgat < 1:1502690‑M2/1‑1 (MQ=255) gctgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCAttt < 2:310662‑M2/80‑1 (MQ=255) tgcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTc > 1:2971037‑M2/54‑135 (MQ=255) gcttagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCg < 1:3628288‑M2/83‑1 (MQ=255) gattagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCg < 1:3307133‑M2/83‑1 (MQ=255) tagcgcttatcacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGaaa > 2:2945872‑M2/50‑135 (MQ=255) cacgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTa < 1:3483826‑M2/96‑1 (MQ=255) acgagaaacaagcagctacttttttccagctacttcgaTGCCCAaaga < 2:2692531‑M2/10‑1 (MQ=255) acgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTaa > 2:362718‑M2/39‑135 (MQ=255) acgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTaa > 1:143496‑M2/39‑135 (MQ=255) acgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTaa > 1:884053‑M2/39‑135 (MQ=255) acgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTaa > 1:1559361‑M2/39‑135 (MQ=255) acgagaaacaagcagctactattttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAATGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTa > 2:86915‑M2/39‑134 (MQ=255) cgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAAc < 1:3829915‑M2/98‑1 (MQ=255) cgagaaacaagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAAc < 2:2398364‑M2/98‑1 (MQ=255) aaacaaccAGCTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTaa > 1:2434089/7‑134 (MQ=1) aaacaaccAGCTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTaa > 1:3084820/7‑134 (MQ=1) caaccAGCTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGACTTCAGCTAGCATTTTCGAAATAGTATTCTAACGCa > 1:1181265/4‑135 (MQ=12) agcAGCTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCaaa > 2:421060/3‑135 (MQ=11) ccAGCTACTTTTTTCCAGCTACTTCGAGAAATGCCCaa < 1:963735/38‑1 (MQ=33) caagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTc < 2:3179163‑M2/50‑1 (MQ=255) aagcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAAtt < 1:2772651‑M2/106‑1 (MQ=255) tcTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAAt < 2:51516/132‑1 (MQ=17) gCTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAAtt < 2:161200/134‑1 (MQ=17) gCTACTTATTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAAtt < 2:1928769/134‑1 (MQ=17) agcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTa < 1:1302935‑M2/107‑1 (MQ=255) agcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTa < 1:360343‑M2/107‑1 (MQ=255) gcagctacttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTag < 1:686420‑M2/108‑1 (MQ=255) cTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTa < 1:649589/123‑1 (MQ=32) cTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACAACAAAAAAGCTTTATACAGATATGAAAAAGTAATTCAGCTATCATTTTCGAAAAAGTATTCTAACGCAAAATTag > 1:2490672/1‑135 (MQ=11) aCTTTTTTCCAGCTACTTCGAGACATGCCCACAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTag < 2:556733/133‑1 (MQ=12) aCTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTag < 2:1208453/133‑1 (MQ=17) aCTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTaga < 1:3382039/134‑1 (MQ=32) aCTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTaga < 1:3784102/134‑1 (MQ=32) aCTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTaga < 1:402362/134‑1 (MQ=32) aCTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTa < 2:2790808/132‑1 (MQ=32) aCTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTa < 1:1841835/132‑1 (MQ=32) aCTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCATCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTAGAAAAAGTATTCTAACGCAAAATTa < 2:2642777/132‑1 (MQ=12) cTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAgaga > 2:1830149/1‑135 (MQ=32) tttttCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAAt < 2:1140675/135‑1 (MQ=32) tttttACAGCTACTTCGAGAAATGCCCAAACAAGTTCCCTAGTAACTTCACTACATCAACAAAGCTTTTTTCAGATATGAAAAAGGAATTAAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAAt < 2:3381840/135‑1 (MQ=11) tttCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATc > 2:1505288/1‑134 (MQ=32) tttCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCt < 2:3287044/135‑1 (MQ=32) ttttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCtt < 2:1559361‑M2/116‑1 (MQ=255) tttttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAAATTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCGAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTc < 2:1982503‑M2/117‑1 (MQ=255) tCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTc < 1:2060554/135‑1 (MQ=17) tCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTc < 1:1646276/135‑1 (MQ=32) ccAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTca < 1:1977542/135‑1 (MQ=17) tttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGATAAAGTATTCTATCGCAAAATTAGAGAATCTTca > 2:303170‑M2/17‑134 (MQ=255) tttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcac < 2:1011986‑M2/119‑1 (MQ=255) tttccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcac < 2:1674635‑M2/119‑1 (MQ=255) cAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcac < 2:723970/135‑1 (MQ=17) cAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcac < 2:2179578/135‑1 (MQ=17) cAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcac < 2:1418459/135‑1 (MQ=17) cAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcac < 1:1760256/135‑1 (MQ=32) cAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcac < 1:3686793/135‑1 (MQ=32) aGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcaca < 1:2795799/135‑1 (MQ=32) tccagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcacac < 2:3787180‑M2/121‑1 (MQ=255) cagctacttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCttcacacgc > 2:631700‑M2/13‑133 (MQ=255) aCTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTc > 2:2260509/1‑93 (MQ=33) aCTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTcacac < 1:462829/132‑1 (MQ=32) cTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTc > 1:1912016/1‑127 (MQ=32) ttCGAGATATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTa < 1:1678648/105‑1 (MQ=12) acttcgaTGCCCAAAGAAGTTCCCTCTGAACATCACTACAGCAAAAAAGCCTTTTTCAGATATGAAGAAGGAATTCAGCTATCATTTACGTAAAAGAATTCTAACGCAAAATTAGAGAATCTTCACACGCATATc > 2:2450628/7‑135 (MQ=11) acttcgaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTCACACGCatat < 1:1109528‑M2/127‑1 (MQ=255) aaTGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTCACACACATATCAAAAc > 2:3481929/1‑135 (MQ=32) tGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCTTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTCACACGCATATCAAAACgc < 1:1381550/135‑2 (MQ=12) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCTACTTTTTTCCAGCTACTTCGAGAAATGCCCAAAGAAGTTCCCTCGGAACTTCACTACATCAAAAAAGCCTTTTTCAGATATGAAAAAGGAATTCAGCTAGCATTTTCGAAAAAGTATTCTAACGCAAAATTAGAGAATCTTCACACACATATCAAAACGT > AssemblyC74_contig_30/1‑166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |