| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_23 | = 9396 | 0 (0.000) | 311 (0.630) | 80/248 | 0.4 | 100% | intergenic (+36/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | DNA‑directed RNA polymerase beta subunit (EC 2.7.7.6)/– |
| ? | AssemblyC74_contig_49 | 1 = | 0 (0.000) | intergenic (–/‑111) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 316 total aligned reads displayed.
ATGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_23/9263‑9396 | atgaGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAt > 2:1401638/1‑134 (MQ=255)atgaGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAt > 1:2964385/1‑134 (MQ=255) tGAGCTGGGAATCTACGTTGGAAAATACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATACAGCAATATGAGCTAAAGTATATAACATa > 2:3018814‑M1/1‑133 (MQ=255) tGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATa > 1:3569224‑M1/1‑133 (MQ=255) gAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATac < 1:3413859‑M1/134‑3 (MQ=255) gAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATac < 2:469968‑M1/134‑3 (MQ=255) gggAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgt < 2:538589‑M1/133‑7 (MQ=255) ggAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtgg > 2:1362390‑M1/1‑126 (MQ=255) gAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaatttt > 1:1671653‑M1/1‑113 (MQ=255) aaaGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttt > 2:1739993‑M1/1‑111 (MQ=255) aaaTTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagag < 1:139359‑M1/135‑32 (MQ=255) aaTTCACTTCGACGAAATACGGCACATTTAATTTTACCAGGATACTAAGTGGAGTCGACGAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagagg < 2:2046003‑M1/135‑33 (MQ=255) aaTTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagagg < 2:3492538‑M1/135‑33 (MQ=255) aaTTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagagg < 1:2847302‑M1/135‑33 (MQ=255) tCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaa > 1:1996924‑M1/1‑100 (MQ=255) aaTACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacat > 2:2561042‑M1/1‑88 (MQ=255) aaTACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacat > 2:3190545‑M1/1‑88 (MQ=255) ggCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttgg > 2:2098854‑M1/1‑83 (MQ=255) aTTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaat > 1:1119461‑M1/1‑78 (MQ=255) aTTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagagg > 2:2212499‑M1/1‑78 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 1:945972‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 2:2820750‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 2:3150793‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 1:1575369‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaa > 2:2926534‑M1/1‑75 (MQ=255) gAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATaccagtggtgctagttaattttttcctataggaaaatgtctaaacatgttggtaaatcaa > 2:2695237‑M1/1‑75 (MQ=255) aTTTTACCAGGATCATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaaca > 1:1595854‑M1/1‑73 (MQ=255) ttttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa < 1:177987‑M1/135‑64 (MQ=255) tttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaa < 2:1634225‑M1/135‑65 (MQ=255) tttACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaa < 1:3150793‑M1/135‑65 (MQ=255) tACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa < 1:1887900‑M1/132‑64 (MQ=255) ccAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaa < 1:1362390‑M1/135‑69 (MQ=255) aGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacg > 1:205972‑M1/1‑65 (MQ=255) taataaGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcata > 1:651542‑M1/1‑61 (MQ=255) aataaGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattatttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatat < 2:3601706‑M1/135‑76 (MQ=255) gAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtc < 2:3569224‑M1/134‑83 (MQ=255) gTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagagg > 1:225047‑M1/1‑50 (MQ=255) gTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagagg < 2:225047‑M1/82‑33 (MQ=255) tCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctca < 1:52955‑M1/134‑86 (MQ=255) gACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgt < 2:143939‑M1/86‑40 (MQ=255) gACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgt > 1:143939‑M1/1‑47 (MQ=255) cTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaac > 2:2525876‑M1/1‑45 (MQ=255) tAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaact < 2:631682‑M1/134‑91 (MQ=255) aGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcc > 1:47809‑M1/1‑43 (MQ=255) aaTGAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactccca > 2:2865100‑M1/1‑41 (MQ=255) gAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaatcgcatatagtagtctcaaaactcccaaga < 1:2695237‑M1/135‑98 (MQ=255) gAACATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaaga < 1:2561042‑M1/135‑98 (MQ=255) cATTATCCAGCAATCTGAGCTATAGTATATATCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1205764‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctgaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:2452212‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1700244‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1575369‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:1005251‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:2510866‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:3747216‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1996924‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:374607‑M1/135‑101 (MQ=255) cATTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgtgggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 2:1136178‑M1/135‑101 (MQ=255) cATTATCCAGAAATATGAGCTAAAGTATATAACATacccgtggtgatagttaattttttcctagagtaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:3018814‑M1/135‑101 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatg > 1:3298967‑M1/1‑34 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatg > 1:774856‑M1/1‑34 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatg > 1:3380312‑M1/1‑34 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatg > 1:3090426‑M1/1‑34 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat > 2:1068640‑M1/1‑34 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaat < 1:1068640‑M1/134‑101 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaact > 2:1525813‑M1/1‑34 (MQ=255) aTTATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaatttattcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatg < 2:2340732‑M1/135‑102 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 2:1023937‑M1/135‑103 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 2:945929‑M1/135‑103 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 2:1822446‑M1/135‑103 (MQ=255) ttATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga < 1:398890‑M1/135‑103 (MQ=255) tATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgag < 1:2098854‑M1/135‑104 (MQ=255) tATCCAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatataggagtctcaaaactcccaagaaatgag < 2:1119461‑M1/135‑104 (MQ=255) tCCAGAAATCTGAGCTACAGTATATAACATacccgtggtgctagtttattttttaatagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagttgtctctaaactcccaagaaatga < 2:3402387‑M1/132‑103 (MQ=255) cAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggac > 1:3807131‑M1/1‑28 (MQ=255) cAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggac > 1:3716531‑M1/1‑28 (MQ=255) cAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaa < 2:2366122‑M1/92‑65 (MQ=255) cAGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaa > 1:2366122‑M1/1‑28 (MQ=255) aGCAATATGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatga > 1:1212629‑M1/1‑27 (MQ=255) tatGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacata > 1:245150‑M1/1‑22 (MQ=255) tatGAGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaa > 1:93972‑M1/1‑22 (MQ=255) aGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgt < 1:1241580‑M1/135‑118 (MQ=255) aGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgt < 1:232888‑M1/135‑118 (MQ=255) aGCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgt < 1:2887447‑M1/135‑118 (MQ=255) gCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgtt > 1:963466‑M1/1‑17 (MQ=255) gCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgt > 1:554571‑M1/1‑17 (MQ=255) gCTAAAGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgt < 2:554571‑M1/134‑118 (MQ=255) tAAAGTATATACCATacccgtggtgatagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagacatgaggactacatatgcgt < 1:2219589‑M1/132‑118 (MQ=255) aaGTATATAACATtcccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatc < 2:764921‑M1/135‑123 (MQ=255) aGTATATAACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatc < 2:3780406‑M1/134‑123 (MQ=255) atataACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaa > 1:1488973‑M1/1‑9 (MQ=255) tataACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaat < 1:2579415‑M1/135‑128 (MQ=255) taACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatat < 2:3378743‑M1/135‑130 (MQ=255) taACATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatat < 2:937947‑M1/135‑130 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaata > 2:960998‑M1/1‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaata > 1:204284‑M1/1‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatat > 2:1154869‑M1/1‑5 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatat < 1:1154869‑M1/118‑114 (MQ=255) aaCATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaa < 2:1241498‑M1/69‑65 (MQ=255) cATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatatact < 2:3090426‑M1/135‑133 (MQ=255) cATacccgtggtgctagttaattttttcctagaggaaaatgtctaaacatgttggtaaatcaacaaaaaaacgcatatagtagtctcaaaactcccaagaaatgaggactacatatgcgttcatcaaaatatact < 1:2505982‑M1/135‑133 (MQ=255) | ATGAGCTGGGAATCTACGTTGGAAAAGACAAAATTCACTACGACGAAATACGGCACATTGAATTTTACCAGGATAATAAGTGGAGTCGACTAGAATGAACATTATCCAGCAATATGAGCTAAAGTATATAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_23/9263‑9396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |