New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_44 = 11360 (0.000)613 (0.590) 97/248 0.2 100% coding (1/1134 nt) rasttk_feature_annotation_tool=annotate_proteins_km er_v2 hypothetical protein
?AssemblyC74_contig_48 = 844 0 (0.000)coding (843/843 nt) rasttk_feature_annotation_tool=annotate_proteins_km er_v2 Chitinase (EC 3.2.1.14)

Only 100 of 613 total aligned reads displayed.

GAAATTACCAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_48/712‑844
                                                                                                                                    |                                                                                                                                      
gAAATTACCAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTga                                                                                                                                      >  1:1722829‑M2/1‑133 (MQ=255)
gAAATTACCAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTga                                                                                                                                      >  2:2242407‑M2/1‑133 (MQ=255)
  aaTTACCAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgat                                                                                                                                     >  2:3052389‑M2/1‑131 (MQ=255)
   aTTACCAAATTCCCTTGCGGTTATTTTTAATGTTTTTAACTGATTATAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgattt                                                                                                                                   >  2:1065751‑M2/1‑130 (MQ=255)
   aTTACCAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgattt                                                                                                                                   >  2:3806846‑M2/1‑130 (MQ=255)
   aTTACCAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatt                                                                                                                                    >  2:1988780‑M2/1‑130 (MQ=255)
       ccAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagt                                                                                                                               >  1:1649762‑M2/1‑126 (MQ=255)
       ccAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagt                                                                                                                               >  1:1807928‑M2/1‑126 (MQ=255)
         aaaTTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtag                                                                                                                             <  1:289179‑M2/135‑12 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:1326487‑M2/1‑121 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:1002469‑M2/1‑121 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  2:207473‑M2/1‑121 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:2643196‑M2/1‑121 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:2512695‑M2/1‑121 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:1249000‑M2/1‑121 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:2544625‑M2/1‑121 (MQ=255)
            ttCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGACATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:441310‑M2/1‑121 (MQ=255)
             tCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgg                                                                                                                         <  2:75326‑M2/135‑16 (MQ=255)
             tCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgg                                                                                                                         >  2:3259475‑M2/1‑120 (MQ=255)
               ccTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgg                                                                                                                         >  2:2925080‑M2/1‑118 (MQ=255)
                    cGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgt                                                                                                                  >  2:2715555‑M2/1‑113 (MQ=255)
                    cGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgg                                                                                                                         >  2:3127407‑M2/1‑113 (MQ=255)
                     gggAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtc                                                                                                                 <  1:812427‑M2/135‑24 (MQ=255)
                               aaGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacg                                                                                                       >  1:1845116‑M2/1‑102 (MQ=255)
                               aaGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacg                                                                                                       >  1:1293988‑M2/1‑102 (MQ=255)
                                aGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAAACAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtatagtgtcacga                                                                                                      >  2:642817‑M2/1‑101 (MQ=255)
                                 ggATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaa                                                                                                     >  2:3383387‑M2/1‑100 (MQ=255)
                                        aaCGTATTAAAGTATGTTGATTTAACTGGTTGTGATTTATCTAAAACAACCAATATTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  2:3301841‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  2:3011621‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  2:3671421‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  1:2270803‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  2:1615271‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  1:958530‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              <  1:1778883‑M2/135‑43 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  2:2310915‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  1:1104354‑M2/1‑93 (MQ=255)
                                        aaCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  1:3485418‑M2/1‑93 (MQ=255)
                                         aCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagca                                                                                             <  2:1956215‑M2/135‑44 (MQ=255)
                                         aCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagca                                                                                             <  2:3473719‑M2/135‑44 (MQ=255)
                                         aCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          <  1:3218129‑M2/106‑15 (MQ=255)
                                         aCGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagta                                                                                                                              <  1:2980809‑M2/102‑11 (MQ=255)
                                               tAAAGTATGTTGATTTAACTGGTTGGGATGTATCTAACACACCCAATCTTTCAAATATGTTCCAAAACTGGGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatg                                                                                        >  2:415703‑M2/1‑86 (MQ=255)
                                                      tGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagg                                                                                 >  1:3065831‑M2/1‑79 (MQ=255)
                                                          gATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgt                                                                            <  2:2381028‑M2/135‑61 (MQ=255)
                                                          gATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgt                                                                            <  2:2111878‑M2/135‑61 (MQ=255)
                                                          gATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgt                                                                            <  2:1729005‑M2/135‑61 (MQ=255)
                                                          gATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttg                                                                             >  1:1208150‑M2/1‑75 (MQ=255)
                                                          gATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  1:635347‑M2/1‑75 (MQ=255)
                                                          gATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  2:605319‑M2/1‑75 (MQ=255)
                                                          gATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          <  2:3431190‑M2/89‑15 (MQ=255)
                                                           aTTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgattt                                                                                                                                   <  2:286196‑M2/79‑6 (MQ=255)
                                                              tAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagta                                                                        <  2:1683257‑M2/135‑65 (MQ=255)
                                                              tAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTga                                                                                                                                      >  1:2801365‑M2/1‑71 (MQ=255)
                                                                aCTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagc                                                                                              >  1:3657044‑M2/1‑69 (MQ=255)
                                                                aCTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttg                                                                                                                          >  1:2023151‑M2/1‑69 (MQ=255)
                                                                 cTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgg                                                                                                                         >  2:2452063‑M2/1‑68 (MQ=255)
                                                                       gggATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaact                                                                >  2:1378388‑M2/1‑62 (MQ=255)
                                                                        ggATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactac                                                              <  2:1492938‑M2/135‑75 (MQ=255)
                                                                        ggATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactac                                                              <  1:1400038‑M2/135‑75 (MQ=255)
                                                                        ggATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgt                                                                                       >  2:2528942‑M2/1‑61 (MQ=255)
                                                                                 tAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaattt                                                     <  1:2084406‑M2/135‑84 (MQ=255)
                                                                                 tAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaattt                                                     >  1:2381028‑M2/1‑52 (MQ=255)
                                                                                 tAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaattt                                                     <  2:3202304‑M2/135‑84 (MQ=255)
                                                                                 tAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaattt                                                     <  2:354448‑M2/135‑84 (MQ=255)
                                                                                 tAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatt                                                                                                                                    <  2:518797‑M2/56‑5 (MQ=255)
                                                                                 tAAAACAAACAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatataactacgttaaattt                                                     <  2:1278146‑M2/135‑84 (MQ=255)
                                                                                      caacCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactg                                                >  2:2577901‑M2/1‑47 (MQ=255)
                                                                                      caacCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactg                                                >  1:2591506‑M2/1‑47 (MQ=255)
                                                                                      caacCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactg                                                >  2:812427‑M2/1‑47 (MQ=255)
                                                                                      caacCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactg                                                >  1:3805750‑M2/1‑47 (MQ=255)
                                                                                      caacCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatt                                                      >  2:887542‑M2/1‑47 (MQ=255)
                                                                                      caacCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatt                                                      <  1:887542‑M2/129‑83 (MQ=255)
                                                                                      caacCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacga                                                                                                      >  1:2744989‑M2/1‑47 (MQ=255)
                                                                                            aTCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttggg                                          <  2:1431810‑M2/135‑95 (MQ=255)
                                                                                            aTCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttggg                                          <  1:3453793‑M2/135‑95 (MQ=255)
                                                                                             tCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttggga                                         >  2:1577852‑M2/1‑40 (MQ=255)
                                                                                             tCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttggga                                         >  1:1956215‑M2/1‑40 (MQ=255)
                                                                                             tCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttggga                                         >  1:232147‑M2/1‑40 (MQ=255)
                                                                                              cTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggat                                        >  1:1910207‑M2/1‑39 (MQ=255)
                                                                                                    aaTATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcac                                   <  1:211954‑M2/134‑102 (MQ=255)
                                                                                                    aaTATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcac                                   <  2:3898199‑M2/134‑102 (MQ=255)
                                                                                                    aaTATGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatt                                                      <  1:1605728‑M2/115‑83 (MQ=255)
                                                                                                        tGTTCCAAAACTGTGATATTTATACGCTTtatttaagtagttgggacatgtctagtgtcacgaatatgatcattattttcatgggttgtagtaatttaactacgttatatttgactggttgggatgtcacctctg                              >  2:1331926‑M2/1‑29 (MQ=255)
                                                                                                        tGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctg                              >  2:3636284‑M2/1‑29 (MQ=255)
                                                                                                        tGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctg                              >  1:55188‑M2/1‑29 (MQ=255)
                                                                                                        tGTTCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctg                              >  1:693167‑M2/1‑29 (MQ=255)
                                                                                                          ttCCAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtg                            >  1:150114‑M2/1‑27 (MQ=255)
                                                                                                             cAAAACTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacg                         <  2:3770919‑M2/135‑112 (MQ=255)
                                                                                                               aaaCTGTGATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaa                       >  1:1431810‑M2/1‑22 (MQ=255)
                                                                                                                   tgttATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatg                   >  2:1234111‑M2/1‑18 (MQ=255)
                                                                                                                   tgtgATATTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatg                   >  1:3367288‑M2/1‑18 (MQ=255)
                                                                                                                       atatTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatgaat                >  1:3593731‑M2/1‑14 (MQ=255)
                                                                                                                        tatTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatgaatag              <  1:3864950‑M2/135‑123 (MQ=255)
                                                                                                                        tatTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatgaatag              <  2:1140701‑M2/135‑123 (MQ=255)
                                                                                                                        tatTGATACGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatgaatag              <  2:2786458‑M2/135‑123 (MQ=255)
                                                                                                                                cGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatgaatagt             <  1:3299484‑M2/128‑124 (MQ=255)
                                                                                                                                cGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctg                              >  1:1555748‑M2/1‑5 (MQ=255)
                                                                                                                                cGCTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttggga                                         <  2:1899120‑M2/100‑96 (MQ=255)
                                                                                                                                  cTTgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatgaatagtatgtttaca    <  2:179199‑M2/135‑133 (MQ=255)
                                                                                                                                    tgatttaagtagttgggacatgtctagtgtcacgaatatgagcaatatgttcaagggttgtagtaatttaactacgttaaatttgactggttgggatgtcacctctgtgacgaatatgaatagtatgtttacaaa  <  2:2645623‑M2/135‑135 (MQ=255)
                                                                                                                                    |                                                                                                                                      
GAAATTACCAAATTCCCTGGCGGGAATGTTTAAGGATTTTAACGGATTAAAGTATGTTGATTTAACTGGTTGGGATTTATCTAAAACAACCAATCTTTCAAATATGTTCCAAAACTGTGATATTGATACGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_48/712‑844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.