| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_47 | = 786 | NA (NA) | 252 (0.290) +AAATGTTACGAATATGAC |
50/212 | 0.0 | 41.4% | noncoding (29/29 nt) | direct | CRISPR repeat with sequence agtgtagatgtaagtaattgggatacgtc |
| ? | AssemblyC74_contig_61 | = 81 | 418 (0.290) | coding (342/420 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein | |||||
Only 100 of 2803 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGC > AssemblyC74_contig_61/1‑214 | caattacttacatctacactcgttaaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCa > 1:2492668‑M2/49‑133 (MQ=255)caattacttacatctacactcgttaaagagccacaattttggaacacaGCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATa > 2:1698646‑M2/49‑135 (MQ=255) ttttcttacatcttacctcgttaaagagccacacaaatataacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACt < 2:1588766‑M2/89‑1 (MQ=255) attacttacatctacactcgttaaagagccacagccataaaacatagaattcatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCatatt > 2:3645613‑M1/68‑133 (MQ=255) attacttacatctacactcgttaaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACt < 1:1076365‑M2/89‑1 (MQ=255) attacttacatctacactcgttaaagagccacaatttttgaacacattattcataaacgtaacgttgGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCatatt < 2:2990638‑M2/68‑3 (MQ=255) attactgacatatacaatcgtttaatagccacagccataatacataGAATTCATAGAAGTAACCTTCGACGTATACCAATTACTTACATCTTCACTCGTTAAAGAGCCACTGCCATAATACATAGAATTCATACt < 2:2572206‑M2/89‑1 (MQ=255) acttacatctacactcgttaaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCAt > 1:756850‑M2/44‑129 (MQ=255) tacactcgttaaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGa < 2:863072‑M2/101‑1 (MQ=255) tacactcgttaaagagccacaatttttgaacacattattcataaacgttacgttgGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGa < 1:36732‑M2/80‑1 (MQ=255) cactcgttaaagagccacaatttttgaacacattattcataaacgtaacgttgGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGACg < 1:3545823‑M2/82‑1 (MQ=255) tcgttaaagagccacagccataaaacatagaattcatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGa < 1:1401431‑M1/80‑1 (MQ=255) tcgttaaagagccacaatttttgaacacattattcataaacgtaacgttgGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCatatt > 2:3458816‑M2/51‑116 (MQ=255) aaagagccacagccataaaacatagaattcatacttgtaacatttGACGGATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTCTCCCaa < 1:1667379‑M1/90‑1 (MQ=255) aaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCaa > 2:3703660‑M2/25‑135 (MQ=255) aaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCaa > 1:3095351‑M2/25‑135 (MQ=255) aaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCaa > 1:2417538‑M2/25‑135 (MQ=255) aaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACAGTGAATTCATAATTGTAACATTTGACGTATGCCaa > 2:2429921‑M2/25‑135 (MQ=255) aaagagccacagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAAATACTTACATCTACACTCGTTAAATAGCCACAGCCATAAAACATAGAATTCATACTAGTAACATTTGACGTATCCCaa > 1:3246374‑M2/25‑135 (MQ=255) aaagagccacaatttttgaacacattattcataaacgtaacgttgGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATATAAGTCATATTAGTAACATTAGACGTATCCCaa > 2:2942278‑M2/46‑135 (MQ=255) aaagagccacaattttggaacacaGCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCatatt > 1:3620176‑M2/25‑111 (MQ=255) aaagagccacaattttggaacacaGCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGACg > 1:2563325‑M2/25‑127 (MQ=255) aaagagccacaattttggaacacaGCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGACGTATCCCaa > 1:3491524‑M2/25‑135 (MQ=255) agagccacagccataaaacatagaattcatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTATCCCAAtt > 2:1930481‑M1/44‑135 (MQ=255) agagccacaatttttgaacacattattcataaacgtaacgttgGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGACGTATCCCAAtt < 1:1254318‑M2/92‑1 (MQ=255) acagccataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATATAATTCATCCTTGTAACATTTGACGTATCCCAAttacttac > 2:2524738‑M2/17‑135 (MQ=255) atccataaaacatagaatacatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTATCCCAATTACTTACAt > 2:58377‑M1/36‑135 (MQ=255) agccataaaacatagaattcatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTATCCCAATTACTTACAt < 1:696590‑M1/100‑1 (MQ=255) ataaaacatagaattcatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTATCCCAATTACTTACAt > 1:3444518‑M1/32‑131 (MQ=255) ataaaacatagaattcatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTATCCCAATTACTTACAt > 2:664854‑M1/32‑131 (MQ=255) ataaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACAt < 2:494933‑M2/121‑1 (MQ=255) aaaacatagaattcatacttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTATCCCAATTACTTACATCGATAg > 1:208820‑M1/30‑135 (MQ=255) aaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAg < 2:2782695‑M2/127‑1 (MQ=255) aaaacataGAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAg < 1:3375984‑M2/127‑1 (MQ=255) aacatagaattcatacatgtaacatttGACGTATCCCAATTACTTACATCTACACTCTTTAAAGAGCCACATCCATATAACATAGAATTCATATTCGTAACATTTGACGTATCCCACTTACTTACATCGATAgtg > 2:2638299‑M1/28‑135 (MQ=255) acagcattcatAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAgtcatattcgtaacatttgacgtatcccaattacttacatctacactcgtt > 1:1605765‑M2/6‑84 (MQ=255) aaTTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTgacgtatcccaattacttacat > 2:2066600‑M2/1‑98 (MQ=255) AATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATATAATTCATAATTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGAtt < 1:3168398‑M1/135‑1 (MQ=255) agtcaTAGAAGAAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaac < 1:2148883‑M2/132‑50 (MQ=255) ATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAg > 1:99979‑M1/1‑125 (MQ=255) ATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGAttt < 1:45039‑M1/135‑1 (MQ=255) tCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAgtcatattcgtaacatttgacgtatcccaattacttacatctacactcgttaaagagc < 2:928023‑M2/135‑59 (MQ=255) tCATAAACGTAACGTTGGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAgtcatattcgtaacatttgacgtatcccaattacttacatctacactcgttaaagagc > 2:2334807‑M2/1‑77 (MQ=255) gAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactaca < 1:2817209‑M2/134‑57 (MQ=255) gAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactaca < 1:1560583‑M2/134‑57 (MQ=255) gAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtag > 1:510582‑M2/1‑78 (MQ=255) gAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAAcccc > 1:2889993/1‑134 (MQ=40) cttgtaacatttGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATTCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTaaccac < 2:3755257‑M1/122‑3 (MQ=255) gTAACGTTGGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAgtcatattcgtaacatttgacgtatcccaattacttacatctac > 1:1001800‑M2/1‑69 (MQ=255) gTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactacagcca > 1:3716995‑M2/1‑75 (MQ=255) gTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactacagcca > 2:804174‑M2/1‑75 (MQ=255) gTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactacagcca > 2:3317043‑M2/1‑75 (MQ=255) aaCCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAg < 2:144329/113‑1 (MQ=39) cGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactacagccattaaacat > 2:3901766‑M2/1‑67 (MQ=255) ACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATAtcat > 1:583649‑M1/1‑135 (MQ=255) cGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgctta > 2:3383982‑M2/1‑64 (MQ=255) cGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTgacgtatcccaattacttacatctacactcgttaaagagccacagccataaaacatata < 1:1883251‑M2/135‑60 (MQ=255) CGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACt > 1:1178194‑M1/1‑66 (MQ=255) CGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACt < 2:1178194‑M1/66‑1 (MQ=255) CGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCt > 2:2149651‑M1/1‑121 (MQ=255) CCAATTACTTACATCTACACTCGTTAAATAGCCACAGCCATAAATCATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGa > 2:1084‑M1/1‑135 (MQ=255) CCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAAc < 2:3544899‑M1/121‑1 (MQ=255) CCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGa < 2:1973944‑M1/135‑1 (MQ=255) CCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGa > 1:1947868‑M1/1‑135 (MQ=255) CCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGa > 2:422582‑M1/1‑135 (MQ=255) CCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGa > 1:222930‑M1/1‑135 (MQ=255) CAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCaaa > 2:3038451‑M1/1‑119 (MQ=255) CAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGaa < 1:931524‑M1/135‑1 (MQ=255) CAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGa < 2:1873833‑M1/134‑1 (MQ=255) CTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACat > 1:2016135‑M1/1‑116 (MQ=255) acacTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTa < 1:1486881/135‑1 (MQ=255) cacTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCg > 2:3172426/1‑129 (MQ=255) cTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATcc < 1:3936829/135‑1 (MQ=255) cTCGTTAAAGAGCCACAGCAATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATcc < 2:3264607/135‑1 (MQ=255) tCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAg < 2:2852722/78‑1 (MQ=255) tCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATccc > 1:3860724/1‑135 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAAgtcatactcgtaacatttgacgtatcccaattacttacatctacactcgttaaagag > 1:3775972‑M2/1‑27 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactacagccattaaacatatactctatataatttaccttcgacgtattccaa < 2:2713519‑M2/135‑103 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactacagccattaaacatatactctatataatttaccttcgacgtattccaa < 2:164840‑M2/135‑103 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATAttcgtaacatttgacgtatcccatttgcttacatccaaggtagttaaactactacagccattaaacatatactctatataatttaccttcgacgtattccaa < 2:3823071‑M2/135‑103 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTgacgtatcccaattacttacatctacactcgttaaagagccacagccataaaacatagaattcatattcgtaacatttgacgtatcccaa < 1:835833‑M2/135‑91 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATAtcat < 2:1773236/103‑1 (MQ=40) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTAt > 1:304079/1‑127 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAtt < 1:3303649/134‑1 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAtt < 2:1362221/134‑1 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAtt < 1:1815102/134‑1 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAt > 1:2608256/1‑133 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAt > 2:1260551/1‑133 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAt > 2:3599006/1‑133 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAt > 1:1728513/1‑133 (MQ=255) aaaGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATATGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAt > 1:2327748/1‑133 (MQ=255) aaaGAGCCACAGCCATAAAACAGAGAATTCATACTTGTAACAATGGACGTATCCCAATTCCTTCCATCGATCGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTAGACGTATGCCTAtt < 2:718311/134‑1 (MQ=17) agagCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTgacgtatcccaattacttacatctacactcgttaaagagccacagccataaaacatagaattcatattcgtaacatttgacgtatcccaatt > 2:3096807‑M2/1‑43 (MQ=255) aGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCt > 1:2770295/1‑134 (MQ=255) aGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTa > 1:2692398/1‑135 (MQ=255) aTAAAACATAGAATTCATACTTGTAACATTTgacgtatcccaattacttacatctacactcgttaaagagccacagccataaaacatagaattcatattcgtaacatttgacgtatcccaattacttacat > 1:644763‑M2/1‑31 (MQ=255) aaCATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGtt > 2:1516072/1‑135 (MQ=255) aaCATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGtt > 1:1320567/1‑135 (MQ=255) tAGTATTCATATTCGTATCATTTGACGTATCCCAATTACTTCCATCGTTAGTGTTAGATTTAACCCCTGCACACATAGCTTTCATTGATGTAACCTTCGACGTATCCCATTTACTTACATCTACACTCGTTAAag < 2:2240754/135‑1 (MQ=11) aaTTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGc > 1:2955487/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGC > AssemblyC74_contig_61/1‑214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |