| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_17 | = 66737 | 4 (0.020) | 907 (1.620) +A |
113/256 | 0.0 | 99.8% | intergenic (+451/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_32 | 1 = | 0 (0.000) | intergenic (–/‑42) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 920 total aligned reads displayed.
AATAGTTGTGTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_17/66607‑66737‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 | aAGTTGTGTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAA > 2:529255/2‑136 GTTGTGTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATT > 2:162485/1‑136 TGTGTTAAGCGATTAACACACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTT > 1:2104018/1‑136 GTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAG < 2:2075003/135‑1 GTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAG < 2:75528/135‑1 TTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGT > 1:1212293/1‑135 TTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGT > 1:2412075/1‑135 TAAGCGATTAACACACGGAATTAGATCTTTGAAAACAGAACAAAGTATCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCTAAGTCAATTCGCTAGCAAATAAATTTTAGTAC > 1:1258586/1‑136 AGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAA > 1:585132/1‑136 GATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATAT > 2:1595110/1‑136 acaCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAAT > 1:1962323/4‑136 acaCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAAT > 1:2318220/4‑136 acaCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAAT > 1:297077/4‑136 acaCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAAT > 1:720030/4‑136 acaCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAAT > 2:618209/4‑136 ACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAAT < 1:1613001/136‑1 ACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAAT > 1:2386693/1‑136 ACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAAT < 2:1373279/136‑1 aCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGA > 1:1357041/2‑136 aCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAAAATTAAATGA > 1:760476/2‑136 TTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCAT < 1:614264/136‑1 AAAACTTAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATATTTAATCAAGAGCAAAACATTAGCGAAGTCAATTAGCTAGCAAAAAAATTTTATTAAAAAATTAAATGAGCTTTTTAGAACTAATCAT > 2:1806311/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 2:1053739/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 1:2062142/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 2:666960/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 1:2289322/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 2:576209/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGAGTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCAT > 2:1207756/1‑136 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGACTCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACACCTTGAAATGAGCTTTTTAGAACTCATCgtg > 2:1913113/1‑133 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATT > 1:2199508/1‑136 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAA < 2:1854671/90‑1 CTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAT < 2:1568001/136‑1 TGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATT < 2:2412075/136‑1 TGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATT < 1:1844434/136‑1 TGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATATTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTGAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATT < 1:2149617/136‑1 GAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAAT > 2:2150098/1‑109 CAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAG < 1:167308/136‑1 AAGTTCCGACGAATCAAATGTGTAGGGTCTCCTGATTTTGAAACAAGAGCAAAACATTTGCGCAGTCAATTCGCTAGCGAATAAATTTGAGTACAACATGAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAG < 1:985404/136‑1 TTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTG < 2:1294393/136‑1 TCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGA < 1:1762357/136‑1 AATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAG > 1:1419208/1‑136 GGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAC > 1:117525/1‑134 GGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGA < 1:893140/116‑1 GGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAC > 2:1678360/1‑134 GTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAC > 1:1700857/1‑133 CTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTG > 2:200270/1‑135 CTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAGTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTG > 2:1017384/1‑135 TCTTGATTTTGAATCAAGAGCAAATCATTTGCGAAGTCAATTCGCTAGCAAATAAATGTTAGTACTATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:237687/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:1085332/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:1423254/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:2199508/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:1146984/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 1:396581/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:1962323/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 1:1053736/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 1:1790525/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 1:2442222/136‑1 CTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCG > 2:2122237/1‑136 TGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGC > 1:945923/1‑136 TGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTAAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGC > 1:802295/1‑136 TGATTTTGAATCAAGAGCAAAACATATGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGC > 2:2300858/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCTCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:653690/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTATTTTGAGAGTTTGATCGTGGCTCAGGACGAACGCTGGCGGCG > 1:1001548/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:1393860/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 2:133820/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:371662/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTCGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 2:480142/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:1454155/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG < 2:2258787/136‑1 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 2:967304/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 2:1729362/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:1578774/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:844227/132‑1 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTG > 1:1082781/1‑107 GAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGT < 1:539788/131‑1 GAATAAAGTGCAAAACATTTGCGTAGTCAATGCGCTAGAAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATGATGTATGTGAGATTTTGATCCTGGCTCAGGACGAACGCGGGCGGCGggagag > 2:358353/1‑130 CAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATAC > 2:1475231/1‑136 CAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATAC < 1:1139321/136‑1 AAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACA > 1:1299702/1‑136 GCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCA > 1:1939035/1‑136 AAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCA < 2:460108/134‑1 ACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC > 2:400558/1‑112 CATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 1:1026402/136‑1 CATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 1:486840/136‑1 CATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 2:1500989/136‑1 CATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 1:328530/136‑1 CATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 2:81513/136‑1 CATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 1:1233401/136‑1 TTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAAC < 2:25406/136‑1 TGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGA < 1:1521203/136‑1 GCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAA < 1:451764/136‑1 CGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGA > 2:886451/1‑134 CGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC > 2:17719/1‑105 TCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGG < 2:717930/82‑1 CAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAGCTCTGG < 1:2013739/135‑1 CAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTG < 1:693648/134‑1 AATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTA > 2:310347/1‑136 AATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAg < 1:1897575/128‑2 ATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCAGTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTAT > 1:837536/1‑136 GCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGAT > 2:1250828/1‑136 | AATAGTTGTGTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_17/66607‑66737‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |