| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_17 | = 66737 | 4 (0.020) | 907 (1.620) +A |
113/256 | 0.0 | 99.8% | intergenic (+451/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_32 | 1 = | 0 (0.000) | intergenic (–/‑42) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 927 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 | aagttgtgttaagcgattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaaataaa < 2:1960991‑M2/6‑1 (MQ=255) gttaagcgattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAg < 1:2066193‑M2/12‑1 (MQ=255) gttaagcgattaacgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAg < 2:1416063‑M2/12‑1 (MQ=255) taagcgattaacacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTac > 1:67621‑M2/122‑136 (MQ=255) taagcgattaacacacggaattagatctttgaaaacagaacaaagtatcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgctaagtcaattcgctagcaAATAAATTTTAGTac > 1:1258586‑M2/122‑136 (MQ=255) gattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAatat < 2:1458820‑M2/20‑1 (MQ=255) acgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAAt < 1:1613001‑M2/25‑1 (MQ=255) acgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAAt < 2:2299010‑M2/25‑1 (MQ=255) acacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt > 1:651793‑M2/112‑136 (MQ=255) acacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt > 1:1965320‑M2/112‑136 (MQ=255) aattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCttt < 2:615929‑M2/32‑1 (MQ=255) ttagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTa < 1:1210362‑M2/35‑1 (MQ=255) ctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACtc > 2:1052973‑M2/96‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 2:666960‑M2/91‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 2:528785‑M2/91‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 1:1347435‑M2/91‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTcatcat > 1:920807‑M2/91‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 2:1287782‑M2/91‑136 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAtt > 2:1233401‑M2/90‑136 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAtt > 1:2199508‑M2/90‑136 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAtt > 2:149737‑M2/90‑136 (MQ=255) tgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 2:2412075‑M2/51‑1 (MQ=255) tgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 1:1844434‑M2/51‑1 (MQ=255) tgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 2:1664376‑M2/51‑1 (MQ=255) tgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 1:482512‑M2/51‑1 (MQ=255) tgaacaaagtttcgacgaatcaaatgtgtagggtctcttgatattgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTGAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 1:2149617‑M2/51‑1 (MQ=255) tgaacaaagtttcgacgaatcaaatgtgtagggactcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATATATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 1:984626‑M2/51‑1 (MQ=255) gaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAAt > 2:2150098‑M2/85‑109 (MQ=255) caaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTgag < 1:167308‑M2/55‑1 (MQ=255) aaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTgaga > 2:1724825‑M2/81‑136 (MQ=255) ttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTg < 2:206067‑M2/61‑1 (MQ=255) caaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTc < 2:1329136‑M2/71‑1 (MQ=255) aaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCa < 1:576428‑M2/72‑1 (MQ=255) aatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAg > 1:1419208‑M2/64‑136 (MQ=255) aatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAg > 1:1139983‑M2/64‑136 (MQ=255) atgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAgg < 1:800997‑M2/74‑1 (MQ=255) ggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAc > 1:117525‑M2/55‑134 (MQ=255) ggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGAc > 1:1379888‑M2/55‑130 (MQ=255) ggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAc > 1:1762655‑M2/55‑134 (MQ=255) ggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAc > 2:211993‑M2/55‑134 (MQ=255) gtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAc > 1:1700857‑M2/54‑133 (MQ=255) tcttgattttgaatcaagagcaaatcatttgcgaagtcaattcgctagcaAATAAATGTTAGTACTATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:237687‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:613131‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:1586247‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:396581‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:1902257‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:1053736‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:2199508‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:2442222‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:1790525‑M2/86‑1 (MQ=255) cttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggcg > 2:1998615‑M2/50‑136 (MQ=255) cttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggcg > 1:759589‑M2/50‑136 (MQ=255) cttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggcg > 2:45930‑M2/50‑136 (MQ=255) tgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:309301‑M2/86‑1 (MQ=255) tgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTGTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggcggc > 2:748569‑M2/48‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgatgtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:1230718‑M2/86‑1 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTATTTTGAGAGTTTGATCGTGGCTCAGGACGAACGCTGgcggcg > 1:1001548‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAt < 1:357992‑M2/50‑1 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:1204813‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:1852650‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATGAATTTTATTACAACCTTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:1624663‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTCGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:480142‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGt > 1:325732‑M2/47‑59 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 1:1454155‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTg > 1:1082781‑M2/47‑107 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACg > 2:1078675‑M2/47‑127 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:844227‑M2/86‑1 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 1:1578774‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:1804742‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:967304‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 1:2311039‑M2/47‑136 (MQ=255) gaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGt < 1:539788‑M2/91‑1 (MQ=255) gaataaagtgcaaaacatttgcgtagtcaatgcgctagaaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATGATGTATGTGAGATTTTGATCCTGGCTCAGGACGAacgcgggcggcgggagag > 2:358353‑M2/41‑130 (MQ=255) aagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACa > 1:1299702‑M2/36‑136 (MQ=255) catttgcgaagtcaattcgctagcgAATAAATTTTAGTACATCATTCACTGAGCTTTTTAGACCTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga < 1:237710‑M2/111‑1 (MQ=255) catttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga < 1:1026402‑M2/111‑1 (MQ=255) catttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga < 2:1551218‑M2/111‑1 (MQ=255) catttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga < 2:564817‑M2/111‑1 (MQ=255) catttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGACTATTACATTTAAGTcga < 2:81180‑M2/111‑1 (MQ=255) atttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga > 2:1138403‑M2/25‑135 (MQ=255) atttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga > 1:2263273‑M2/25‑135 (MQ=255) tttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaac < 1:1942776‑M2/113‑1 (MQ=255) tttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaac < 2:25406‑M2/113‑1 (MQ=255) tgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaacga < 1:240948‑M2/115‑1 (MQ=255) tgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaacga < 1:1521203‑M2/115‑1 (MQ=255) tgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaacga < 2:399677‑M2/115‑1 (MQ=255) gcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaacgaa < 1:451764‑M2/116‑1 (MQ=255) cgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaacga > 2:886451‑M2/20‑134 (MQ=255) gaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAAct < 2:1357041‑M2/118‑1 (MQ=255) agtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAActct < 2:2241825‑M2/120‑1 (MQ=255) tcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTgg > 1:717930‑M2/15‑82 (MQ=255) tcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTgg < 2:717930‑M2/68‑1 (MQ=255) tcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAGCTCTgg > 2:1012337‑M2/15‑136 (MQ=255) caattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAGCTCTgg < 1:2013739‑M2/122‑1 (MQ=255) caattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAGCTCTg < 1:2967‑M2/121‑1 (MQ=255) aattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGtcgaacgag < 1:1897575‑M2/116‑2 (MQ=255) attcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACtcat > 1:874093‑M2/12‑54 (MQ=255) attcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCAGTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTat > 1:837536‑M2/12‑136 (MQ=255) gaaTAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGt < 1:2110661/133‑1 (MQ=255) aAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCa < 2:1768786‑M2/105‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |